Coniophora puteana: CONPUDRAFT_134023
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Entry
CONPUDRAFT_134023 CDS
T03134
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cput
Coniophora puteana
Pathway
cput03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CONPUDRAFT_134023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_134023
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_134023
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CONPUDRAFT_134023
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CONPUDRAFT_134023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-CCHC_2
zf-CCCH_RBM22
F-box_5
Motif
Other DBs
NCBI-GeneID:
19200558
NCBI-ProteinID:
XP_007763376
JGI:
Conpu1_134023
UniProt:
A0A5M3N6D1
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MANPLAGPSTLKDIVNPQFHQNNFPQENYVKIELGLKLDKDDQICRLSLTSTGCPLGPLH
CPLRHTTPSSQNFQPPKQLPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPE
CWWYAKYGYCSAGDECLYAHPKERRAECPDYRRGFCKLGPMCPRKHVRRVACQAYLTGLC
PLGPECPRGHPKPGLPTPKEYEPPEPPSTRDLGPPPPGYGRYADFDRSAGGAGAMSGTGF
TGPPRRNLDEVLCFKCGEKGHYANHCRNRNVPGNRGGVDRATVRRFGGSDED
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccacttgctggcccatctacactcaaagacattgtcaatccacagtttcac
cagaataatttccctcaggagaactacgttaaaatagaacttggactcaaactcgacaaa
gatgaccaaatatgcagactatcgcttacctccactggttgccccctgggtcctcttcat
tgtccgctgagacacactacgccatcttcccagaactttcagcctcctaaacagcttcca
acacatcctcgcgatagggagcgtctcgccaccgtctgtaagcattggcttcgcggcctt
tgtaagaaaggagatgcatgcgagttcttgcacgaatacaaccttaggcgtatgcctgaa
tgttggtggtacgccaagtacggatattgctctgctggcgacgagtgcctgtatgcgcat
cctaaggagcggcgggcggagtgtcctgattatagacggggcttttgcaagctcggacct
atgtgtcctcgcaaacatgtcagaagggtggcctgccaagcatatcttacggggctttgc
ccattaggaccggaatgtcctcgtggccatcccaaacctggccttcccactcccaaagag
tacgagcccccagaacctccttcaacccgtgacctgggaccgccgcccccaggttatggc
agatatgcagactttgaccgtagtgccggaggagctggggctatgtctggaactggattc
accgggcctcccaggaggaacctcgacgaagtactgtgcttcaagtgtggtgaaaagggt
cactatgcaaaccattgcaggaatcgtaatgtccctggtaacagaggtggcgtagaccgc
gcaactgtcaggaggtttggggggtctgatgaagattga
DBGET
integrated database retrieval system
