Coniophora puteana: CONPUDRAFT_161645
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Entry
CONPUDRAFT_161645 CDS
T03134
Name
(RefSeq) WD40 repeat-like protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
cput
Coniophora puteana
Pathway
cput03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CONPUDRAFT_161645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cput03009
]
CONPUDRAFT_161645
Ribosome biogenesis [BR:
cput03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CONPUDRAFT_161645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
19204557
NCBI-ProteinID:
XP_007763645
JGI:
Conpu1_161645
UniProt:
A0A5M3N784
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MAALKALNRAPLLVKQPKDIPLPLSPADSDDYAQPRNARKNKKPQAKPKTKVKGKDGPPP
PTPHPINPTSRSQEILVDGGQPWTWRSLTDSSTNANRPLFTRDGSHFFSISGNNVKIHSS
ASGKVASTLPGTHHGGHTDVVTCAIINTQNPFQLITGSLDGTLKIWDYLEGKLLYSLTLD
QPIYNLCAHSTIKGHVFVSAAKPKKARNDVPKKPGEGSQNQDESCVVLRVSLKPKDSSSG
VKNFKSSQVVPVGKTKPTSGIEISASGQWLVAVAGHKAYVAKTSALKSGFTKYVSPDPLT
CLAVHPSQDYFATGDARGVIRLWYCLNEDMPKVTGVEKRAQTSTFHWHAHAVSSIAFTSN
GAYLLSGGEESVLVIWQLHTQKKEFVPRVGSPIKSIVVSRNTSSEEEYLLGLADASYAFV
NSTTLKLARVFSRIKIDPDVPSRWDIPTPLAVHVNSSTLILPSSHPSSLQTYSIDSSMVT
SELEVSPSNRVSRRDEKALQPSRVERIALSFCGHWMATLDRRLDDEDIHGESYLKFWRWD
KRIAFWILNTRVNKPHGQHRITSMSFNPVGMDNVDLLQLVTTGEDGCVKSWRLRIDREIQ
NASWTGRSQFGFRSEIPRHISWSPDGSLLAIALDPYVAVYNPVTNSLRYTIICSNCKHVT
SAHFVGASGRYLVVQGGSDLILWDMVTQSMRWHYRNDGTIYKVVSHPHHDLFAIFHTSRL
GVRFTTDLKLFGVKSSRPTISHTFPFGLRSVAWHTNPRKSRQPSFSLVGITQSYSVVLLG
NNLTNAEDEDDVSKALPRNLTEQKRTLFEEMFGISAFVDVKSPSNVSQSNVNTALPWKQQ
DTSRILDTPAFLMPPMETLYDSLISGFLRLRTNDQDQQLDGVSETAAEDGMDIDQDVEDV
TNNTLGLDEAEKELQLFGDFFEKMTGSSGYPLLAKNAMPSERSTPPASRSLRSQNRATPM
SQVIPPDTFQSPDVPTQVGKKRSRNKA
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctcaaggctctcaatcgcgctcctctcctcgtcaagcagccaaaggatatt
ccacttccactcagccccgctgactccgatgactatgcccagccgaggaacgccagaaag
aacaaaaagcctcaggctaagccaaaaactaaggtcaaagggaaagacggaccgccaccg
cctacacctcacccgatcaaccccacctcccggagtcaggagattctagtagatggtggg
cagccgtggacttggagatctctgacggactcgagcacgaacgcgaatcgacctctgttc
accagggacggcagccactttttctcgatatctggtaacaatgtcaaaatccactcctct
gcttcgggcaaagttgcatcaacccttcctggtacacaccacggcggccatacggacgtg
gtcacttgtgctatcatcaacacacagaacccttttcagctcataacgggatcgctcgat
ggcactcttaagatctgggactacttggaggggaagcttctatactcgctcactctcgac
cagcccatttacaacctctgcgctcactccactatcaaaggtcacgtatttgtttcagcc
gcgaagcccaaaaaggcgaggaatgatgtcccaaaaaagccaggcgagggcagccagaac
caggacgagagttgcgtggttctccgtgtttcactaaagccgaaagactcgtcatccgga
gtgaagaacttcaagtcttcccaggtggttcctgtaggcaagacaaaacccacgtccgga
attgagatttctgccagcggccagtggctagttgctgtcgcggggcataaggcatacgtt
gccaagacttcggctctcaaatccggcttcacgaagtatgtttcgccagacccgctgacc
tgcctggccgtgcatccatcgcaggactactttgcgacaggtgacgcgcgaggtgtcatc
cgactatggtactgccttaatgaggatatgcccaaagttactggtgttgagaagagagcg
cagacttcgacatttcactggcacgcacatgccgtgtcatcaatcgcattcacatcgaat
ggtgcttatctattgagtggtggcgaagagtcggtcttggtcatttggcaactgcacact
cagaaaaaggagtttgttcctcgagtaggatcgcccatcaagagcatcgtcgtatcccgc
aatacttcctcagaggaagaatatttgcttggtttggcggacgcaagttatgccttcgtc
aattcgacaactctaaaacttgcgcgtgttttctctcgaataaagattgatccagacgtc
ccgagtagatgggacatacctacgccactggcagttcatgtcaattcctcgacgttaatt
cttccgtcttcgcacccctcgtctctccaaacatattctatcgactcctctatggtgaca
tccgaactcgaggtgtcgccgtcgaatcgagtttcccgccgagacgagaaggccctgcaa
ccatcacgcgtagaacgcatagcattatccttctgcggtcattggatggcaactcttgat
cgtagattagatgacgaagacattcatggtgaaagttaccttaaattttggcgatgggat
aagcggatagcattctggatattgaataccagagtcaacaaaccgcacggacaacatagg
ataacttccatgtccttcaatccggtagggatggacaacgtagatctacttcagttagtt
acaactggtgaagatgggtgcgtcaaaagctggaggttgcgtattgacagagaaatacaa
aatgcttcgtggacgggtagatcgcaattcggcttccggtctgagataccaaggcacata
tcgtggtcgccagacggaagtcttctagcaattgctttggacccgtatgtggccgtgtac
aaccctgtcacaaactctctcaggtatactatcatatgctccaactgcaagcatgtgact
tcggcacactttgttggcgccagtggtcgatatttggtagtgcagggtgggagtgacctg
attttgtgggatatggtaacacagtcaatgaggtggcattaccgcaatgatggcaccatt
tacaaagttgtttcacatccccaccatgacttgtttgccatattccacacgagtcggctt
ggtgtgcgcttcacgacggacctaaaactgttcggtgtcaaatccagtcgacctaccata
tcccatacttttcctttcggactgcggtcagtagcgtggcacactaacccaagaaagtca
agacaaccatcgttctctcttgtcggcatcactcaaagctacagcgtcgttctattaggc
aacaatcttaccaatgctgaagatgaagatgacgtttccaaagccctcccgcgcaacttg
accgaacaaaaaaggacattgtttgaagagatgttcggcatctcagcctttgtagacgtc
aaatcgccttcgaatgtttctcaatcaaacgtcaatactgctttaccatggaaacaacaa
gacactagtcgtatcctcgatacacctgctttccttatgccaccaatggagactttgtac
gactctctgatcagtggtttcctgcgacttcggacaaacgatcaagatcaacaactcgac
ggcgtatcagagactgctgccgaagatggaatggatatcgaccaggatgtagaagatgtc
acaaacaatactctgggacttgacgaggctgagaaggaactacagcttttcggcgatttc
ttcgagaaaatgaccggctcatcaggatatccactcctcgcaaagaatgctatgccctct
gaacggtccacgccaccggctagtagatcgcttagatcgcaaaatcgagcgacgcctatg
tcccaagtcatcccgcccgatacattccagtcccctgatgtgcctacgcaagttggcaaa
aagcggagcaggaataaagcatga
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