Coniophora puteana: CONPUDRAFT_166613
Help
Entry
CONPUDRAFT_166613 CDS
T03134
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
cput
Coniophora puteana
Pathway
cput03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CONPUDRAFT_166613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_166613
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CONPUDRAFT_166613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
19205589
NCBI-ProteinID:
XP_007770277
JGI:
Conpu1_166613
UniProt:
A0A5M3MMN8
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MATTAQAPEPPKDPQSEAIKAQIFQRLHPRSYLERYISEDVRPDGRGFEDWREVSVNVGS
ISTAHGSALVRMGDTRIVCGVKAEIAEPELDKPHEGFLVPNLDLPALCSPKFKPGPPAEE
AQILSERLNEALVASGILPLESLAIHPGKAVWTIYIDAICLNFDGNAFDAALLAMVAALY
NTRLPVATFDEDTGHTTCLRKETVPLELTCKPISTSFGMLDSLQVLSDPTSFEEPLMDTT
VSVVVNEKGDLLAVNELGLGTMTTQKSGDLLKNCIEKSKLRVSNLVALI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggctaccactgcacaagcaccagaacctccaaaagacccgcagagtgaggcgatcaag
gctcaaattttccagcgcctgcatccgcgctcgtacctcgagcgatatatctcggaagac
gttcggcctgacggacgcgggttcgaggattggcgggaggtatctgttaacgtcgggtca
atatcaaccgcacatggatcggcgctggtgcgcatgggcgacacgaggatcgtgtgtggg
gtcaaggcagagattgcggagcccgagctggacaagccgcacgaggggtttcttgtaccc
aacctcgacctcccggcgctgtgttcgcccaagttcaagcccggtcctccggcggaggag
gcgcagatactgtcggaaagactgaatgaggctttggttgcctccggcatcctacccctc
gaatcactcgccattcaccccggcaaagccgtctggacgatatacatcgacgcgatatgc
ctcaacttcgatggaaatgcgttcgatgccgctttattagccatggttgctgcgctgtat
aacacgcggttaccggtagcaacgttcgatgaagacacgggtcacacgacgtgcttgcgg
aaagaaacggtcccactggagttgacgtgcaaacctatatctacctcgttcgggatgctt
gactcgcttcaagtcctctcagatccgacgtcgttcgaggagccattgatggacactact
gtatcggtggtggtcaatgaaaaaggcgatctactcgccgtgaacgagctcggcttagga
actatgacaacccaaaagtctggggatcttttgaaaaattgtatcgagaagtcgaagcta
cgggtgtcaaatctagtcgccctaatctaa
DBGET
integrated database retrieval system
