Coniophora puteana: CONPUDRAFT_31952
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Entry
CONPUDRAFT_31952 CDS
T03134
Name
(RefSeq) RBP11-like subunits of RNA polymerase
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cput
Coniophora puteana
Pathway
cput03020
RNA polymerase
cput03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CONPUDRAFT_31952
09124 Replication and repair
03420 Nucleotide excision repair
CONPUDRAFT_31952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_31952
03400 DNA repair and recombination proteins [BR:
cput03400
]
CONPUDRAFT_31952
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CONPUDRAFT_31952
DNA repair and recombination proteins [BR:
cput03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CONPUDRAFT_31952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
19206719
NCBI-ProteinID:
XP_007771084
JGI:
Conpu1_31952
UniProt:
A0A5M3MIB2
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNAPNRFELFVLEDGEKPVEVTEDTKIPNAATFKIVKQDHTLGNMIRAQVLSMPQVLFAG
YKVPHPLQPYFLLKIQTDGSLTPQAALEQACTKLISTISTIEKKFKREFSIREVEGAVPE
DPYGAGAGAGMGW
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccccaaccgctttgagctcttcgtccttgaggatggcgaaaagcccgtcgag
gtgaccgaagacacgaaaatccccaacgctgccaccttcaagatcgtcaagcaggaccac
acgttgggcaacatgatccgcgctcaagtcctctcgatgccccaagtcctcttcgccggg
tacaaagtcccacaccccttgcaaccctacttcctgctcaaaatccagaccgacggcagc
ctcacgccgcaagcggccctcgagcaggcgtgtacgaagctcatcagcaccatcagcacc
atcgagaagaagttcaagcgcgagttctcgatccgcgaggtcgagggcgccgtccctgag
gacccgtacggcgccggtgcgggcgcgggcatgggctgg
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