Coniophora puteana: CONPUDRAFT_48733
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Entry
CONPUDRAFT_48733 CDS
T03134
Name
(RefSeq) transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
cput
Coniophora puteana
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_48733
03036 Chromosome and associated proteins [BR:
cput03036
]
CONPUDRAFT_48733
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CONPUDRAFT_48733
Chromosome and associated proteins [BR:
cput03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CONPUDRAFT_48733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
SH2
S1
HHH_3
DUF7800
Motif
Other DBs
NCBI-GeneID:
19207289
NCBI-ProteinID:
XP_007764097
JGI:
Conpu1_48733
UniProt:
A0A5M3N172
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MRDPEVPSDDSSEEQEDDEEEERRIRDGFIVDEEEEEEEEDDEEERRRRRKRRKRKHRRR
EGEEDALEEDDLELLEENTGTSFRNRLTRLRRGGESSSHSKRKAVVESSDDDLDNDDLEL
PQVQDIQRIWDDDRGGGRDEEEDMDDFIDYEDDVEGADEQEREARRLERKKRERERRKAL
GPNQLAGIEADAWDEIHDIFGDGHEYDWALAGDDALELDEDHLKNETRYQDVFEPSELRA
RMLTEDDDLIRARDIPERMQLATSSMSDSATLALTSTLTEADIDDAAMWVTVRLSPHKTR
DFFSPDGPYHQYMQHLVMAVSYALRYLFVHEYEVPYIWTHKRDYISYFEKTDMRTRIELI
SLPELWRIYALGQKYRSMVERKQALSVAYQRLGVQDDYFEQNITPKVDSVEVVADATEWL
SMRYKVQKKDALELHFHDDDEQPEGRKRKAPSRLSAYEVAKKTIASKLAEQGFGIKAHEV
VLNFVSSNQTHFVEDQDLNPIAFAERFTEPEQGIAYAGPEELLRRARMILSTELGKDPIL
RQEIRELFKHEAEISVLPTERGLSKVDEHHTYFNFKYLSHKSIGLMLDSPQFLNILAAEA
ELLVNVSIVLPNDVKARFERRLMDAFSSDSYSDTAKAWNAERSRVVTEAMEQHLLPVGAK
WAREWLREEVEDALALHCGNELKSRIDIAPFCTADMQPGDTCSVLAMSWGKGDPQKDAIT
MVFLDEAGRLREHTKIDNLVDEDYRDEFLDILKRRRPDVIVIGGFSMATTKLSSRVKDIV
HGRRQQEGPPTDAWSQPQAPAPPNEQAFNIPVIYVNDEVARIYQHSRRAAEEFSALSSIA
KYCIGLSRYVQNPLNEYAAMGSDITAIALEEEHQNLVPKEKLLFALERAIVDITNKVGVD
INRAVNESYYQHLLPFVCGLGPRKAQVLVKKIAAMGGNLVNREQFIKASLLTTKIFLNAA
GFLRITNDPDMKPAKGRLADDDVQDPLDDTRIHPEDYELARKMATDALELDEEDIHDEHP
SHVVSLIMRDEDNEKKLNDLNLDEFAVNMYEANEDRKRHTLNVIRQELLRSFAEQRGPFP
LMKEWDVLTMLSGETQRTLRMGFIISVLVVRLTANFVSVRLDSGIEGVINIEYVTEEGNI
HPDKVLKKGQTIAGVVVDVKLNLDADQFYVELSARKSDLNSGDAIFRRVKHDEDWNKTQY
ERDVEMQVRKKRAEVDRTRRVIKHPNFHNFNASQAEVYLDKQQRGDVVIRPSSKGIDHLA
VTWKVEDKLYQHIDVTEINPDPSGQGLGTLLVVDERHQYADLDELIVNHVQATARKVEEL
MAHEKFKHGPEDELHHFLKNFVAANPSKSIYGFTLNRRKPGHFNLCFLANKNASVQIWPV
RVTPEAYCLFEAEVAGVPELCDAFKVRCDIYGKVSVRPHLTNAQASPSISKPCRRRRWGQ
NSLWSWCPYASSDTWPCNSRTHVRPSACTCPDS
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaccccgaagtcccctcagacgacagttccgaggaacaagaggatgacgaggaa
gaggagcggaggatacgcgacggattcatagtggacgaggaagaagaagaggaggaggaa
gatgacgaagaggaaaggaggaggaggcgcaagcggcgaaagagaaaacatcgccgccga
gagggggaggaagatgctctggaggaagacgaccttgagcttcttgaagagaacacagga
acctccttcagaaatcgtcttacgcgtctccgtcgcggtggcgagtcaagctctcattct
aaacggaaggctgtcgttgaatcgtccgacgacgacttggacaacgatgaccttgagctc
cctcaggtccaagacatccagcggatctgggacgacgaccgtggtggggggcgtgatgag
gaggaggacatggatgacttcatcgactacgaagacgatgtagaaggcgctgacgagcaa
gaacgtgaagcgcgtcgactggagagaaagaaacgcgagcgcgaacgacggaaagcgttg
ggcccgaatcaactcgccggaattgaagcagacgcttgggatgaaatccatgacatcttc
ggtgatggtcatgagtacgactgggcgctggcaggcgacgacgcgttggagctggacgaa
gatcacttgaaaaacgagacgagatatcaagacgtttttgaaccatctgagttgcgcgca
cgtatgctgacagaggacgacgatctaatcagagctcgggacatccctgagcgtatgcag
cttgctacctcgtctatgtctgattcggctactctcgctctaacctcaacgctgaccgaa
gcggatatcgatgatgccgcaatgtgggtgaccgtgcgcctttctccccacaaaacccgc
gacttcttcagtccggatgggccataccatcagtatatgcagcatctcgtcatggctgtg
tcctacgccctccgatacctcttcgtccacgagtatgaggttccctacatctggacccac
aagcgcgactacatctcgtactttgagaaaacagacatgaggacacggatcgaacttatc
agtcttcccgagctatggcgcatctatgctcttggtcagaagtaccgctctatggtggag
aggaagcaggcgctcagcgtggcgtaccagcggcttggtgtccaggatgactactttgag
cagaacatcactccaaaggtggacagtgtggaggtcgtggctgacgctacggaatggttg
tccatgcggtacaaggtgcagaagaaagacgcactggaacttcacttccacgacgatgac
gaacaaccagagggtcgtaaacgcaaagctcccagtaggctatccgcttatgaagttgca
aagaagaccatcgcttccaagcttgcagagcagggttttggtataaaagctcacgaagtc
gtgctcaacttcgtgtccagcaaccaaacacacttcgtcgaggatcaggacctcaacccc
atcgcgtttgcggaacgtttcactgaaccagagcaaggcattgcttacgctggtcctgag
gagctattgcgacgcgcgcgcatgatcctatcgacggagttggggaaggacccaatactt
cgtcaagagatacgagagctcttcaagcacgaggccgagatatcggttctaccaacagaa
cgcggacttagtaaggtcgacgagcaccatacatactttaacttcaaataccttagccac
aagagcatcggccttatgctcgacagtccgcagtttttaaacatcttggcggctgaagca
gaactccttgtaaacgtctctatcgtcttacccaacgatgtcaaggctcgtttcgagcga
cgcctcatggatgccttttcctccgatagttacagtgacacagccaaggcatggaacgct
gagcgctcgcgtgtagtaaccgaggccatggagcagcaccttcttcctgtgggtgctaag
tgggctcgcgaatggcttagagaggaagtcgaggatgccctggcgcttcattgtggtaac
gaactgaaatcacgcatcgatatcgcaccgttctgcacggcagacatgcaaccaggagat
acgtgctctgttcttgccatgtcttggggtaagggtgaccctcaaaaggacgccatcact
atggtgtttttggacgaggccggtcgcctgcgtgagcacaccaagattgataacctggtt
gacgaagactatcgagacgagttcctcgatatcctcaagcggaggcgacctgatgtcatt
gtcattggcggcttcagcatggctacaacgaaactatcttcacgtgttaaagatatcgtg
catggacgacgtcaacaagaaggcccccctacagatgcatggagccaaccacaggccccc
gcgccgccaaatgagcaggctttcaacatcccagtcatctatgtaaatgacgaagttgct
cgcatctatcaacatagtcgtcgagctgccgaggagttcagtgctctatcctccatagcg
aagtactgcattggactttcacggtatgttcaaaacccgctgaacgaatacgctgccatg
ggatcggatatcactgccattgcacttgaagaagaacatcaaaatctggtgcctaaggag
aagcttctgttcgcattggagcgtgctatagtcgatatcacgaacaaagttggcgtagac
atcaaccgagctgtcaacgagtcatactaccagcacttgctcccctttgtttgcggtctt
ggacccaggaaggctcaagttttagtcaagaaaattgcagctatgggaggcaacctagtc
aatcgagaacagttcatcaaagcgtcactacttaccacgaagattttcctcaatgccgct
ggtttcctccgcatcaccaatgacccagacatgaaacccgccaagggtcgtctcgccgat
gacgatgtccaggatccattggacgacactcggattcacccagaggactacgagttggct
cgtaagatggccaccgacgccttggaacttgatgaggaggatatacacgatgaacacccc
tcgcacgtcgtttcattgatcatgcgcgacgaagacaacgaaaagaagctgaacgatctt
aacctggacgaatttgctgtcaacatgtatgaagcaaacgaggataggaaacggcatact
ctcaacgtcattcgccaagagcttctcaggtcattcgccgaacaacgaggacctttcccg
ctcatgaaggaatgggatgttctgaccatgttgagcggtgaaacccagcgtacgctgagg
atgggtttcatcatctctgttctggttgtgcggctgactgccaactttgtctccgtccgc
ttggactccggcatagagggtgtcatcaacatcgaatatgtcacggaggagggcaatatt
cacccggacaaagtgctgaagaagggtcaaaccatcgctggtgttgttgttgatgtcaag
ttgaacctcgacgctgaccaattctacgttgagctctctgcgcgaaagtcagacctcaac
tccggagatgccatcttccgccgtgtcaaacacgatgaagactggaacaaaacacagtat
gaacgcgatgtggaaatgcaagttcgtaagaaacgcgcggaggtggatcgtaccagacgg
gtcatcaaacatcctaatttccataatttcaatgctagtcaggcggaagtgtacctggac
aagcaacagcgtggggatgtcgtcatcagaccatcctcgaagggtatagaccatttggct
gttacgtggaaagtcgaagacaagctgtatcagcacattgatgttacggagatcaacccc
gatcccagtgggcaagggcttggcactctccttgtcgtcgacgagaggcaccaatatgct
gatttggatgaattgatcgtaaaccatgtgcaagccactgcgcgcaaagttgaagagcta
atggcacacgagaaattcaagcatggccctgaggatgaacttcatcatttcctcaagaat
tttgtcgcggccaatccatcaaaaagtatctacggctttacgctcaaccggcgcaaacca
gggcatttcaacctttgcttcttggctaacaaaaacgcatcggttcaaatttggcctgtt
cgagttacgcccgaggcttattgtttatttgaagctgaagtcgctggagttccggagctc
tgcgatgctttcaaagtcaggtgcgatatctatggcaaagtctctgttcggccacatctg
acgaatgctcaggcatctccatcaatctcaaaaccttgccgccgccgccgctgggggcaa
aactccttatggagctggtgcccgtacgccagctcggacacctggccatgcaactcccgg
acgcatgtccgtccgtcagcctgcacctgcccggactcctaa
DBGET
integrated database retrieval system
