KEGG   Coniophora puteana: CONPUDRAFT_56293
Entry
CONPUDRAFT_56293  CDS       T03134                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
cput  Coniophora puteana
Pathway
cput03420  Nucleotide excision repair
cput04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CONPUDRAFT_56293
  09124 Replication and repair
   03420 Nucleotide excision repair
    CONPUDRAFT_56293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cput04121]
    CONPUDRAFT_56293
   03400 DNA repair and recombination proteins [BR:cput03400]
    CONPUDRAFT_56293
Ubiquitin system [BR:cput04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     CONPUDRAFT_56293
DNA repair and recombination proteins [BR:cput03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      CONPUDRAFT_56293
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CONPUDRAFT_56293
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Csa3_N
Other DBs
NCBI-GeneID: 19207781
NCBI-ProteinID: XP_007768254
JGI: Conpu1_56293
UniProt: A0A5M3MRK2
LinkDB
Position
Unknown
AA seq 1245 aa
MKVVTTFHPSSSVLASCKWQLLDDARSEFLVIAKLNQLDIYSLQPEGLKYEDGLEIWGRV
RAVRVVPIKKSTEMHLLVLTDHPEPELVFITYTTHTSRKNELRITKKLSLAERTGRIAEF
FVDLLVDPTGQLAIVSTYAGKLKVVQLDDGEYDSDFDVSTTELNLLSLATILPSPDDLTV
ALLHVDYQQRLQLLTRDLSLKELQLSPLPSAVLPSVPLAAKHFSVDEEVPKLIHVPISEK
DEESFAGGVLVIGGSKIFLYDLAPAEKQRKQKEKQRRTQKKKASADSDEVMKDEGKEKKK
KARASVEWPWAEVSAWCQVDDVGRRFLLGDKFGRLVMLCVDISSNSSLTLIALGETSPAT
TLTYLSNQVVYLGSHYGDSQLLQISPSRLSDSDTPTLPVPGDIHTVTHIPHSSPGSDYDR
RHRGFIVNGRGSHLTEVDRFQNIAPIYDAALVDPDNSGQYEVVTCSGGQNTGSIRLVRSG
ADFQEAAAIGGIPNITNIWPVRSLYSDPIHTHIVASTPQETYVFRIDNKHTVSHVADSGF
VTGKKRTLVVQNLQKKVPKEAGQGLTYMDSSLVLQVTSDELVLLNLDKGLGEFTRVGDGV
CKMGQLAGGKPGWIDREIVAASANASQVVLGLSFGRLAVVNFADNKFKLVGYRDFTNPSG
GIAEISAVSCTPADQSKSFSPMAAVAFWQTHRVEIISLGSPFPTLCASVSLPSLPRSLLM
HRFAGESANAPPHLLVGRADGVVATFVLKDKALVEQKQIPVGNLPVTFHTCKAKGRTAVF
ACGSRTSVLFWEKDRLRHSPLILKEVAAAASLHTHDYRSSLVLATSEGLVIGDVQNLEKL
HIRSIHTGLDNPRRISHSPVHKALAVGCVRHTPVRVGEPEISRGSVQLYNDTTLDKLGQV
VLDHDEEPMAIKALSVRVAEEAKDCFVVGTVIIDSLENESSSGRLLLVEPDYSRGESFVA
VSASEKVKGCVYAVAAVDGLVVAAVNSAVVIYSIEADDHTRALSFVKKVEWNHNYVVANL
VSRGNLLLVGDAISSVTLLQYERGALQNVARDYSPLWPTSVEMLDERNVIGADNDCNLFM
FTLQDGAERKVLERNGHYYFGDMVNKFIPGEIYRALSSFEASDIEVEPKQLFFTTTGSIG
VVIDMSDELSLHMSSLQRNLSTYFAAQPGGASHTKYRAPKNARGRSDADNSSFGFLDGDL
LERFLLFGDDEEAVRKVLEGSTEAEQLSIAPERIIKVLERLQSMH
NT seq 3738 nt   +upstreamnt  +downstreamnt
atgaaggtcgtcaccactttccatccctcttcttcggtcctagcatcgtgcaagtggcag
ctcctcgatgatgctcgctcagagttcctcgtcatagccaagctcaaccaactcgatatc
tactcacttcagccagaagggctcaagtacgaggatggcctggagatatgggggagggtc
cgggcggtacgcgtcgtccctatcaagaagagtacagaaatgcaccttctcgttttgacg
gaccaccctgagcccgagcttgtcttcatcacttacactacccacacatcgcggaagaac
gaactgcgtatcaccaagaaactctccctcgccgagcgcacaggtcgaatagccgagttc
ttcgtcgacttgcttgtagatcccactggccaactcgcgatagttagcacgtacgccgga
aagctcaaggtggtacaacttgacgatggggaatatgatagtgatttcgatgtctccact
actgagctcaacttgctaagcctggctaccatcttgccgtccccagatgacctcaccgtc
gccttgttgcacgtggactaccagcagcgcctgcagctcctgacgcgcgacttgagcctc
aaggaactccagctgtctcctttgccgtcggccgtgctcccttccgttcctctcgcggcc
aagcacttctccgtggacgaggaggtgcccaagctcatccacgtgcccatatcggagaaa
gatgaggagagctttgcgggtggggttttggttatcggaggctccaagatatttctgtat
gatctggcgccggcggagaagcagcgcaagcaaaaggaaaagcagcgtagaacgcagaag
aagaaggcgagtgcggactcggacgaggtcatgaaggatgagggaaaggagaagaaaaag
aaggcgagggctagtgtggagtggccatgggcagaagtcagcgcatggtgtcaagtcgat
gatgtagggcgacggttcttgctcggcgacaagtttggaagactcgtcatgctctgtgtg
gatatttcttccaattcgtcacttacgctaatagcgcttggagagacttcgcctgctacg
acgctgacatatctctcgaatcaagtggtatacctcggctcacactacggcgattcgcaa
ctgcttcagatatctccttcgcgactatccgattccgacacaccgacacttcccgtgccc
ggcgacatccacactgttactcacataccccattcctcaccaggtagcgattacgacagg
agacatcgcgggtttattgtgaatggccggggaagtcacctcactgaggttgatcggttc
cagaatattgccccaatatatgacgcggccttggtggatccggataacagtggccagtat
gaggtcgtgacttgctcaggtggtcagaatacggggtcgatcagactcgttaggagcggt
gccgatttccaagaggcagccgccattggaggcatcccaaatatcacgaacatttggcct
gtacgctcgctgtacagtgatccaatacacacgcacatcgtcgcatctactccacaagaa
acttatgtcttccgaatagacaacaagcacacggtatcccacgttgccgatagtgggttc
gtgacggggaagaagcggaccttggtcgtgcagaacctccagaagaaggtccccaaggag
gcaggtcagggactgacgtacatggactcatcgctggttcttcaagtcacgtcggatgag
ctggtcttgttgaatctcgacaaaggcctaggggagtttacgcgtgtcggggatggcgta
tgcaagatggggcagttggcgggcggcaagccaggatggatcgatagggagattgtggct
gcaagtgcgaatgcgagccaagttgtgctgggactcagctttgggcggcttgcggtggtg
aattttgcagacaataagttcaagctcgtgggctatcgggattttacaaacccttctggt
ggcattgctgagatatctgctgtttcttgcacgccggcggaccagtccaagagcttttcg
ccgatggcggcggtagcattctggcagacccatcgtgttgagatcatatctcttggcagt
cctttcccaaccctctgtgccagcgtctcactgccgtcgctccctcgttctctgctcatg
cataggtttgctggcgaaagtgctaacgcgcccccacaccttctggttgggagggcagat
ggtgtcgtcgcgacgttcgtattgaaggacaaagcgctcgtggagcagaagcagattccg
gtggggaacctgcctgtcacgtttcatacgtgcaaggcaaaggggagaaccgcagtcttt
gcttgtggaagtcggacgtcggtgttgttctgggaaaaggatcggctccggcattcgcct
ttgattttgaaggaagttgctgctgctgcatccctgcatacccatgattatcgctcgtcg
ctcgtgcttgcgacgtcagaaggccttgtcattggagacgttcaaaatttggagaagttg
catattagatcaatacatactggtctcgacaacccgcgtaggatcagccacagtcctgtg
cacaaggcactggctgtcggctgtgttcgtcacactcccgtgagggttggagaacccgag
atctcgagaggatccgtgcaactgtataacgacaccaccttggacaagctgggccaggtg
gtcctggatcacgacgaggaaccaatggcgatcaaggcgctttctgttcgtgtcgcagag
gaggcaaaagattgcttcgtcgtgggcacggtgataattgacagcttggagaatgaatca
agttccgggcgtctcttgcttgtcgagcccgactactcgcggggcgagtcgtttgttgcc
gtcagcgcttccgaaaaggtcaagggatgcgtgtatgcggtggctgcggttgatggtctt
gttgtcgcggctgtcaatagcgctgtggtgatctacagcattgaagcagatgatcacaca
agagcgctatcattcgtgaaaaaggtcgagtggaatcacaactacgtggtggcaaacttg
gtctcccgaggcaacttgctgttggttggcgacgccatcagctctgtgactcttttgcag
tatgagaggggagcactgcagaacgttgctagggattatagtccattatggccgacttcg
gtggagatgctggatgagcggaacgttattggtgctgataacgactgcaacttgtttatg
tttacgcttcaagacggagcggagcggaaggtactggaacggaacgggcactactacttt
ggtgatatggtgaacaaattcattccaggtgagatatatcgcgccctgagctcgtttgag
gcgtcggacatagaggtagagcctaagcagctcttcttcaccacgaccggcagcattgga
gtggtgatcgacatgtctgatgaactgtcgttgcacatgtcctcgcttcagagaaatctg
tccacgtactttgctgcccagccgggtggtgccagtcataccaagtatcgtgctccgaag
aatgcacggggtcgaagcgacgcggataattcttcatttggcttcctcgatggggacctc
ttggagcgattcttacttttcggcgacgacgaagaggccgtccggaaggtgctcgaggga
tcgacagaggcagagcagctgagtatcgcgccggagaggatcatcaaagtgctcgaacga
ttgcagagcatgcactag

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