Coniophora puteana: CONPUDRAFT_59891
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Entry
CONPUDRAFT_59891 CDS
T03134
Name
(RefSeq) WD40 repeat-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cput
Coniophora puteana
Pathway
cput03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CONPUDRAFT_59891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cput03041
]
CONPUDRAFT_59891
Spliceosome [BR:
cput03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CONPUDRAFT_59891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
PRP4
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SCAP
RMC1_N
Beta-prop_HPS5
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_DCAF12
WD40_like
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
19208062
NCBI-ProteinID:
XP_007770476
JGI:
Conpu1_59891
UniProt:
A0A5M3MLB2
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MDDGNFLGSERARIENQVILDELERKKKARNMAVPTDDNRVKARLREIGEPITLFGERAA
DRRDRLIYVLSQINAARGEDAAMDEDSSSESEDEVSPAQPSSIAQQEEFYSLGSLELLEA
RRRLAEYSLPRAQNRVAQQRIDAKMNLGKIIDIRKKVFAEVKRYGNLGSQIGDERPISQV
RFSPDNKMLATGSWSGCVKLWNVPACTPIQTLRGHGDRVGGVAWHPQATLSQSADGVNLV
SGASDNCVNFWSLNSDAPLSVLKGHQDRVCKVAFHPSGNYVGSASFDTTWRLWDVATTKE
LLLQEGHSKEVYAIEFQDDGALAASGGLDAIGRVWDIRTGRTAMVLDGHVESIFSISFSP
NGYQIATGAGDDTIRIWDMRSLKALYTIPAHLSNVSDVRFFHADKSTDTSEFYTEDEWRF
RSGLYFASAGYDGLVKLWSADDWQLLRTLATDAGKVMSVDLTSDAQLLASGTYNRNFQLF
APEDLPI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggacgatggcaacttcctgggctcggagcgcgccagaatcgagaaccaggtcatcttg
gatgagctcgagcgcaagaagaaggcgcgcaacatggccgtgcccacggatgacaatcgc
gttaaagcacgcctgagggagataggagaaccaatcacgctatttggtgaacgtgccgca
gaccgaagagaccgtctcatttatgttctctcccaaataaacgcggcaagaggggaagat
gctgccatggatgaggattcctcttcagaaagtgaagatgaggtatcccccgctcaaccc
tcgtccatcgcacagcaagaagagttctactccctcggctcgctcgagctcctggaggcg
cgcaggcgcctcgcagagtactcgctccccagagctcaaaaccgcgtagcacaacagcgg
atagacgccaagatgaacctggggaagatcatcgacatcaggaagaaggtctttgctgaa
gtcaagcgctacggaaacctgggctcgcaaattggtgacgaacggccaatttcgcaagtt
cggttttcgccagacaataagatgcttgctactggaagctggtcaggctgtgtcaagcta
tggaatgtgccggcttgcacaccaatacaaacccttcgaggtcacggcgaccgcgttgga
ggtgttgcgtggcatccgcaagctaccctgtctcaaagtgcagatggcgtcaacctcgtt
tcgggagcatcggacaattgcgtcaatttctggtcactgaacagcgatgcacccttgtcc
gttctaaaaggtcatcaagaccgtgtttgcaaagtcgctttccatccgtctggaaattat
gtcggctcggccagtttcgataccacatggcggttatgggatgtggcaaccaccaaggag
ctgctcctccaggaaggacattcaaaagaagtctacgctatcgagttccaagacgacggt
gccttggccgcttcaggaggactcgacgcaatcggtcgcgtgtgggacatccgaacaggc
cgaacagccatggtcctcgacggccacgtcgagtccatattctccatcagcttctcgccc
aacggctaccaaatagccaccggcgccggcgacgacaccatccgcatctgggacatgcgc
tccctcaaagccctctacaccatccccgcgcacctgtccaacgtctccgacgtccgcttc
ttccacgcggacaagagcacggacacgtccgagttctacaccgaggacgagtggcgcttc
cgctcgggcctgtactttgcaagcgcgggctacgacgggctcgtgaagctgtggagcgcg
gacgactggcagctgctgcgcacgctggcgacagatgcgggcaaggtgatgtcggtggac
ctgacgagcgacgcgcagctgttggcttctgggacgtataacaggaacttccagcttttc
gccccggaggatctgccgatatag
DBGET
integrated database retrieval system