KEGG   Coniophora puteana: CONPUDRAFT_60913
Entry
CONPUDRAFT_60913  CDS       T03134                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
cput  Coniophora puteana
Pathway
cput03013  Nucleocytoplasmic transport
cput03015  mRNA surveillance pathway
cput03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CONPUDRAFT_60913
  09122 Translation
   03013 Nucleocytoplasmic transport
    CONPUDRAFT_60913
   03015 mRNA surveillance pathway
    CONPUDRAFT_60913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_60913
   03041 Spliceosome [BR:cput03041]
    CONPUDRAFT_60913
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CONPUDRAFT_60913
    TREX complex
     CONPUDRAFT_60913
Spliceosome [BR:cput03041]
 Complex C
  Other components
   EJC/TREX
    CONPUDRAFT_60913
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CONPUDRAFT_60913
SSDB
Motif
Pfam: RRM_1 RRM_occluded GlcNAc-1_reg
Other DBs
NCBI-GeneID: 19208120
NCBI-ProteinID: XP_007771132
JGI: Conpu1_60913
UniProt: A0A5M3MGZ1
LinkDB
Position
Unknown
AA seq 128 aa
MDKSLDDIIATRRTPRRGSSRRGTAKAQVLGRGNAAPTTRAQAAATTAAAKPTVQQPADK
IIVSNLPQDVNEAQVKELFHTTVGPLREVTLHYDSAGRSKGVAAIHFQRKGDGTKAYQQY
NNRLIDGS
NT seq 387 nt   +upstreamnt  +downstreamnt
atggacaagagcctcgacgacatcattgccacccgtcgcaccccccgccgtggttcctcg
cgccgtggcaccgccaaggcccaagttctcggtcgcggaaacgccgcccccactactcgt
gctcaggccgccgccactactgccgctgccaagcctacggtccagcagcctgctgacaag
atcattgtttcgaatctgccccaggatgtgaacgaagctcaagtcaaggagcttttccac
accaccgtcggcccccttcgtgaggtgaccttgcactacgatagtgcgggtcgttccaag
ggtgttgctgccattcatttccaacgcaagggagacggcaccaaggcctaccagcaatac
aacaaccgcctcatcgatggaagttag

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