Coniophora puteana: CONPUDRAFT_78750
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Entry
CONPUDRAFT_78750 CDS
T03134
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cput
Coniophora puteana
Pathway
cput03013
Nucleocytoplasmic transport
cput03015
mRNA surveillance pathway
cput03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CONPUDRAFT_78750
09122 Translation
03013 Nucleocytoplasmic transport
CONPUDRAFT_78750
03015 mRNA surveillance pathway
CONPUDRAFT_78750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_78750
03041 Spliceosome [BR:
cput03041
]
CONPUDRAFT_78750
Enzymes [BR:
cput01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CONPUDRAFT_78750
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CONPUDRAFT_78750
Spliceosome [BR:
cput03041
]
Complex C
Other components
EJC/TREX
CONPUDRAFT_78750
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CONPUDRAFT_78750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
19209807
NCBI-ProteinID:
XP_007762751
JGI:
Conpu1_78750
UniProt:
A0A5M3N5N5
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSAHDNEELIDYEDEHDVVPNGGVSASNGAVAGGVADGEEKDKKNFSGIHATGFRDFLLK
PELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNGE
VSVLVLCHTRELAFQIKNEYSRFAKYMPDVRVSTFYGGTPVTKDAETLRDKSKCPHIVVA
TPGRLNALVRDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRSTPHHKQVMMFSATL
AKEIRVTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLDESAKNRKLNELLDTLEFNQVV
IFVKSVARAIELDKLLVSCNFPSISIHSGLQQEERINRYSAFKAFEKRILVATDIFGRGI
DVERVNIVINYDSPPDADSYLHRVGRAGRFGTKGLAITFVSSESDQQVMAAIQSRFEVAV
PELPDHIDPASYMTS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcacgataacgaggaacttatcgactacgaggatgagcatgacgttgtcccc
aatggcggtgtttctgcttccaacggggccgtcgcaggaggtgtagccgacggcgaggaa
aaggacaagaaaaacttctctggcatccatgccacaggttttagggattttctgttgaaa
cctgagcttctgcgtgccattagtgaccttggttttgagcacccttcggaagttcaacag
gaatgtattccccaagccgttttgggcatggatgtcctttgccaagccaagtctggtcac
ggcaagacggctgtgttcgtccttgcgacgcttcagcagcttgagccagtgaatggcgag
gtctctgtgcttgtgctctgccacactcgagaactggccttccagatcaagaacgaatac
tcgcgattcgccaagtacatgcctgatgtacgcgtcagcaccttctacggcggcacccct
gtcaccaaggacgcggaaacgctccgtgacaagtcgaaatgtcctcacatcgtcgtcgcc
acgcccggtcggctcaatgccctcgttagggacaaggtccttgatgccaaaaacgtcaag
cacttcgtactggacgagtgcgacaaaatgctcgaacagctcgacatgcgccgtgacgtg
caggagattttccgctcgacccctcaccataaacaagtcatgatgttcagtgccaccctc
gcgaaggaaatcagggttacttgcaagaaattcatggctaaccctctggaaatcttcgtc
gatgatgagacgaagctcactctccatggtctacagcaacattatgtcaaattggacgag
agcgccaagaaccggaaattaaacgaacttcttgatactctggaattcaaccaggtcgtt
atcttcgtcaagtcggttgctcgtgccattgagcttgacaaactgctcgtatcatgcaac
ttccctagtatcagcattcactctggtttgcagcaggaagaacgcattaaccgatattcc
gcgttcaaggcatttgaaaagcgtatcctggttgcgaccgacattttcggccgtggaatt
gacgttgaacgagtgaacattgtcatcaactacgactcgcctccggacgccgatagttac
ctgcatcgcgtgggccgtgctggacggttcggtacgaaaggtctggcgatcacgtttgtg
tcgtcggagagcgaccagcaagtcatggctgcgattcaatcaagattcgaggtcgctgtg
ccagagttgcctgaccacattgacccggccagttacatgacgtcttga
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