Coniophora puteana: CONPUDRAFT_80615
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Entry
CONPUDRAFT_80615 CDS
T03134
Name
(RefSeq) RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cput
Coniophora puteana
Pathway
cput03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CONPUDRAFT_80615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cput03041
]
CONPUDRAFT_80615
03009 Ribosome biogenesis [BR:
cput03009
]
CONPUDRAFT_80615
Enzymes [BR:
cput01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CONPUDRAFT_80615
Spliceosome [BR:
cput03041
]
Complex A
U1 snRNP components
U1 related factors
CONPUDRAFT_80615
Complex B
CONPUDRAFT_80615
Ribosome biogenesis [BR:
cput03009
]
Eukaryotic type
Pre-60S particles
Helicases
CONPUDRAFT_80615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19210105
NCBI-ProteinID:
XP_007765494
JGI:
Conpu1_80615
UniProt:
A0A5M3MYJ5
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MSYGGSYSGGGFGGGGGYGGGGGGYGGGRGGWSGGGGGGHGDRMDGLGGGLKNIDWSSAK
LERFEKNFYVEDKRVSAMSDREIEEFRRTKEIKIHGRDVPRPVTSFDELGFPEYILSTIR
AQGFPNPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPGDGPIA
LILAPTRELAVQIQQECTKFGSTSRIRNTAIYGGAPKGPQVRDLTRGVEVVIATPGRLID
MLESGRTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQKLA
NDFLNDFIQCNIGSMELTANHNIAQIVDVVSDFEKRTKLIKHLDQISAENAKVLIFVGTK
RVADDITKYLRQDGWPALAIHGDKEQRERDWVLSEFKAGRSPILIATDVASRGLGTFFIL
QALHQGTISESHHTGNHTRIEREVCVC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggcggcagctacagcggcggcggcttcggtggaggaggaggatacggtggc
ggtggcggaggttatggtggtggtcgtggtggatggagcggagggggagggggaggccac
ggggaccgcatggacggcctcggtggcggtctcaaaaacattgactggtcctctgcaaag
cttgagcgctttgagaaaaacttctatgtcgaggacaagcgtgtctcagccatgtccgac
agagagatcgaagagttccgtcgcaccaaggagattaagatccatggtcgtgatgtccca
agaccagtgacttcgtttgatgagctcggtttcccggaatatatcctttctacgattcgg
gcacaaggcttccctaaccctacgcccatccaatgtcaagcttggccaatggctctcagt
ggtcgtgatgttgttgccattgctcagactggtagtggcaagacgatctcgtttgctctt
cctgctatgttgcacatcaatgcacaacccctcctggcaccaggtgatggtcccatcgcc
cttatattggcaccaactcgtgaacttgcagttcaaattcagcaagagtgtactaaattt
gggtcgacctcgcgcattcgcaacactgccatctacggtggtgctcccaagggccctcaa
gtccgcgacctcactaggggtgttgaagttgtcattgcaacgccaggtcgtctgattgat
atgcttgagtctgggcgcaccaaccttcgtcgtgtgacttaccttgtcatggatgaggct
gaccgcatgcttgacatgggtttcgagcctcaaattcggaagattgtgtctcagatccgt
ccggatagacaaacgctgatgttcagtgccacctggccgaaagatgtccagaaactggcc
aatgacttcttgaacgacttcattcagtgcaacattggctctatggagctgactgctaac
cataacatcgcgcaaatcgttgacgttgtcagtgactttgagaagcgcactaagctcatc
aagcacctcgaccaaattagtgccgaaaatgccaaagtcctcatcttcgtcgggacgaag
cgcgtggcggatgatatcaccaaatacttgagacaggatggatggccggcgttggccatc
catggtgacaaagaacagcgagaacgtgactgggttctaagcgaattcaaggctggacgc
tcaccgattttgattgccacggatgttgcatcgcgtggtctcggtacgtttttcatactg
caagcgcttcatcagggtacaatctccgagtcgcatcatactggtaatcacacccgcatt
gagcgggaggtctgtgtttgctaa
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integrated database retrieval system
