Coniophora puteana: CONPUDRAFT_86564
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Entry
CONPUDRAFT_86564 CDS
T03134
Name
(RefSeq) exoribonuclease
KO
K07573
exosome complex component CSL4
Organism
cput
Coniophora puteana
Pathway
cput03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CONPUDRAFT_86564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_86564
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CONPUDRAFT_86564
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CONPUDRAFT_86564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
19211121
NCBI-ProteinID:
XP_007763332
JGI:
Conpu1_86564
UniProt:
A0A5M3N6A8
LinkDB
All DBs
Position
Unknown
AA seq
187 aa
AA seq
DB search
MASDILLPGQPVFLRGPAPSLGGGLYLSEGQVRASVVGVPRQQGSTISIPRIRPHPPTTN
SVVLGTVTRLTPIQAMVSISVVDDVPLPTGEEFIGVIRNQDVRATEKDKVKIGDCFRGGD
VVKGSVISLGDARSYYITTARNDLGVVFATSEAGATMDPVSWKEMRCPKTGRLEKRKCAK
PEGLVGN
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgacattctactcccaggacagccagttttcctacgggggcctgctcccagc
ctgggtgggggtctctatctcagtgaaggtcaggtcagggccagtgtggtgggcgtcccg
cgtcaacaaggatctacaatctctattcctcgtattcgaccgcacccacccacgacaaac
tccgttgtccttggtactgtcacccgactgacacctatacaggcaatggtgtctatttca
gtggtggatgatgtcccgcttcccactggggaggagttcattggtgtaatccgtaatcag
gacgttcgagcgaccgaaaaggacaaggtgaagatcggggattgctttcgaggaggggac
gtcgtgaaggggtcggttatatctctgggagatgcacgtagctactacatcaccacagca
cgcaacgatcttggtgttgttttcgcgacaagtgaagccggtgcgacgatggacccggtg
tcatggaaggagatgcgatgtccgaagacgggacggctggagaagcgcaagtgcgcgaag
ccggaaggattagtaggcaattag
DBGET
integrated database retrieval system