Coniophora puteana: CONPUDRAFT_87479
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Entry
CONPUDRAFT_87479 CDS
T03134
Name
(RefSeq) tRNA-intron endonuclease catalytic domain-like protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cput
Coniophora puteana
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cput03016
]
CONPUDRAFT_87479
Enzymes [BR:
cput01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CONPUDRAFT_87479
Transfer RNA biogenesis [BR:
cput03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CONPUDRAFT_87479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
19211183
NCBI-ProteinID:
XP_007764627
JGI:
Conpu1_87479
UniProt:
A0A5M3N263
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MPEPIRLRVSNGVAYVWDVDDIAVLRSHHHICGALTGTLPHLSQQNVFLGVPLVLMPEEV
VLLLEKKLAIIVDDPSAHHEPTLPAIEKWNEERTQDVTTQLAFNAEKEAKETLSGRGTSE
KALQKRREREERKEAARAIAHSNGEVDETEPAAAAAESGAKPTQPVTEVPQSLTKVVLPA
HTVQVAALSDRLDWYTPSPHTYPSLALAHDAGIWMYPSNLSERARCGVFRSLWEQGFFMG
VGVKFGGEYLVYPGDPLRYHSHFVASVVDSPDTVIRPMEIVAHGRLGTGTKKAHLMCEWD
DDTRTVNYTSIEWAGFG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccaatccgactcagggtatccaatggcgttgcttatgtgtgggatgtcgat
gatatcgccgtgctccgttcgcaccatcatatatgcggcgctctgaccggtacactcccg
catctatcccagcagaacgtgttcctgggcgtgcccctcgtgctcatgcccgaagaagtg
gttcttctgcttgagaaaaagctggcaataatcgttgatgatcctagtgctcatcacgaa
ccgactcttccagcgatcgagaaatggaacgaggaacgtacacaggacgtgaccacccaa
ctcgcttttaatgcggaaaaagaggcaaaggaaacactatctgggcgaggaacgtcggaa
aaagccttgcaaaagcgtagagagcgcgaagaacgaaaggaagctgcaagagcgattgca
cattcaaacggcgaagtggacgaaaccgaacccgcagccgcagccgcagaatcaggcgcc
aaacccactcaacctgttactgaagtcccacaaagcttgacgaaagttgtgttacccgca
catacagtccaagtcgccgctctttccgacagacttgattggtataccccttcgccgcat
acatatccatcccttgctctcgcacacgatgccggtatatggatgtaccccagcaacctc
tcagaacgtgcacggtgcggtgtcttccgtagtttatgggagcagggcttctttatgggc
gtcggtgtgaagtttggaggcgaatatttagtgtacccgggtgacccactccgctaccat
tcacacttcgtcgccagcgtggtagactctcctgatactgttattagaccgatggagatc
gttgcacatggacgtcttggcaccggtaccaagaaagctcatctcatgtgtgagtgggac
gacgacactcggactgtgaattacacgtccatcgagtgggcaggatttggctaa
DBGET
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