Coniophora puteana: CONPUDRAFT_89026
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Entry
CONPUDRAFT_89026 CDS
T03134
Name
(RefSeq) Metallo-hydrolase oxidoreductase
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cput
Coniophora puteana
Pathway
cput03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CONPUDRAFT_89026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_89026
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_89026
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CONPUDRAFT_89026
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CONPUDRAFT_89026
U7-dependent histone pre-mRNA processing factors
CONPUDRAFT_89026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
19211291
NCBI-ProteinID:
XP_007766903
JGI:
Conpu1_89026
UniProt:
A0A5M3MWB8
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MADAPTLSITLLGAGQEVGRSCCVLQYRGITIVCDAGIHPAYSGMASLPFVDELDWSTVD
ALLVTHFHLDHAAALTYIMEKTNFRDGKGKVYMTHPTKALHKFMMQDYVRMSSSSSDALF
TPLDMSMSLSSIIAISAHQLITPCPGVTFTPYHAGHVLGACMFLIDIAGLKILYTGDYSR
EEDRHLVKAEVPPVRPDVLIVESTYGVQSLECREDKEARFTGLVHSIIRRGGHVLLPAFA
LGRAQELLLILDEYWKRHPDLHNVPIYYASNLARKCMAVYQTYIHTMNSNIRTRFAKRDN
PFVFKHISNLPQPKGWERKIAEGPPCVVLASPGFCQSGPSRELLELWAPDARNGFILTGY
SVEGTMARDILNEPDEIMSTKGNIIPRKISVDYISFSAHVDYSQNAEFIDLVKAQHIVLV
HGEQTAMGRLRGALTSKYKDREEDVKIHTPRNLETLELTFRGERVAKAIGTLADNPPQQN
DVLSGLLVAKDYSYTLLDPRDLRDFAGLSTCTLTQRQMVTLGVGWELVRWHLEGMFGSVE
EGVDKDGVPTMRVMGVIDVKQAEEQLAVLEWESSASNDMIADSTLALITGIDKSPASAKL
TSQNHSCSHSHPHSDATNNSSVTRVQHIAWFLEAHFGDIELHMPDADQMESEGKGEEDSD
PSLFVSLDETGARINLLTLEVTSESESLKKRVEAVLDMAITTVSSLSETFATGGSPLTDA
AVTTREKYKGITNSATPEQIQDDANDVEEEEPTEKTEDATMGDETAQAAA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcgcccactctgagcatcaccctcctgggtgccggccaggaagttggacgg
tcatgctgcgttctgcaatatagagggatcaccatcgtctgcgacgcgggcatccaccct
gcctacagcggtatggcatcgctgcctttcgtcgatgagctagactggagtacggtggat
gctttacttgtcacccattttcacctggaccatgctgccgctctcacatatatcatggaa
aagaccaatttcagagacggtaagggcaaggtgtacatgacacatccaaccaaggctttg
cacaagtttatgatgcaagattatgttcgaatgagttcatcgtcgtccgacgccttattc
acgcccctggatatgtcaatgtcgctctcatctatcattgccatctcagcccaccaactc
attacgccatgtcctggagtgacattcactccataccacgcaggccatgttcttggtgct
tgcatgttcctcattgacattgcagggctgaaaattctgtacactggggactattctcgc
gaagaggatcgccacctggtcaaggcggaggttccccccgttcgtcctgatgttctcatt
gtcgagagtacgtacggtgtacagagtttggagtgcagagaagacaaagaggcccgtttt
acgggtctagtgcactcgattatccggcgtggtggacatgtcttgctcccggcctttgct
cttggtcgcgctcaagaattgttgctcattctggacgaatattggaaacggcaccccgat
cttcacaatgtgcccatctactatgcttctaacttggctcggaagtgtatggccgtctat
caaacgtacatccacacaatgaactcgaatatccgaacacgattcgcaaaacgagacaat
ccttttgtattcaagcatatatctaaccttcctcaaccaaaaggatgggagcgcaagatt
gctgaaggtcccccttgtgtcgttctggctagtcctggtttctgtcagtctggacccagt
cgcgaactcctcgaactttgggcaccagatgcgcgaaacggattcattctaaccggttat
tcagttgaaggtactatggctagggacatcctgaacgaaccggatgaaatcatgtcaacg
aaaggaaatatcatacctcgaaaaatctccgtcgactacatttccttcagtgcacacgta
gactactctcagaatgcagagttcatcgacctcgtcaaggctcagcatatagtccttgtg
catggagaacagaccgcgatgggtaggttgcgaggagctctgacgtcgaaatacaaggac
cgagaggaagacgtgaaaatccatactcctcggaacctcgagacgcttgaactgacattc
aggggagaaagggtcgcaaaggcgattggtacccttgccgacaatccgcctcaacaaaac
gatgtcctgtcagggttgctagtagccaaggattattcttacacactcctggacccacga
gaccttcgcgacttcgccggattatcaacatgcacactgacgcagcggcagatggttact
cttggcgtaggttgggaactcgtgcgatggcatttagagggcatgttcggaagcgtcgaa
gaaggcgtggacaaagacggcgtacccactatgagggtcatgggggtcatagatgtcaag
caagctgaagaacaactagctgtgcttgaatgggagtctagtgcaagcaatgacatgatt
gcggattctacgctggctctcatcacgggcattgataaaagtcctgcttcggccaaattg
acgtcgcaaaatcactcatgctcgcattcgcatcctcactcggacgctaccaataattct
tctgttacccgtgtccagcacatcgcgtggttcttggaggctcacttcggtgacatcgag
cttcatatgccagacgctgatcagatggaaagcgagggaaaaggagaggaagacagtgat
ccctcactgtttgtaagcctagacgaaactggcgccaggatcaatctactcaccctggag
gtgaccagcgagagcgagtctctcaagaaacgggttgaggctgtcctcgacatggctatc
actactgtcagctcgctgtcagagactttcgcaactggtggttcgccgttgacggatgca
gcggttaccactcgagaaaaatataagggaatcaccaactctgctacgcccgagcaaatt
caagatgatgcgaacgacgtcgaagaggaggaaccaacggaaaagactgaagatgctacg
atgggagacgagacggcacaagcagcagcttaa
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integrated database retrieval system
