KEGG   Coniophora puteana: CONPUDRAFT_90969
Entry
CONPUDRAFT_90969  CDS       T03134                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cput  Coniophora puteana
Pathway
cput03020  RNA polymerase
cput03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CONPUDRAFT_90969
  09124 Replication and repair
   03420 Nucleotide excision repair
    CONPUDRAFT_90969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cput03021]
    CONPUDRAFT_90969
   03400 DNA repair and recombination proteins [BR:cput03400]
    CONPUDRAFT_90969
Transcription machinery [BR:cput03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CONPUDRAFT_90969
DNA repair and recombination proteins [BR:cput03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CONPUDRAFT_90969
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_InsA DUF7459 Zn_ribbon_Elf1 zf_UBZ C1_1 zf-C2H2 Lar_restr_allev zf-CHY HVO_0758
Other DBs
NCBI-GeneID: 19211428
NCBI-ProteinID: XP_007770004
JGI: Conpu1_90969
UniProt: A0A5M3MK77
LinkDB
Position
Unknown
AA seq 123 aa
MASLHFCSECNNLLYPKADPARRNMVYACRICTYDEDVDNACVYRNDLLTVTKEQKGVVT
DLGTDPTLAHSNIPCPRCHNEDAVYFQDQSKRKETRMILFFVCSKCNESFSDPSLPQDAR
PEM
NT seq 372 nt   +upstreamnt  +downstreamnt
atggcctctcttcacttctgctcggaatgcaacaacctactctaccccaaggctgacccg
gcgcggcgcaacatggtgtacgcatgccgcatctgcacctatgatgaggacgtggacaat
gcgtgtgtgtaccggaatgacttgctcacggtgacgaaagagcagaagggtgtcgtcacg
gaccttggcacggatccaacgctggcacactccaacatcccatgtccgcgctgccacaac
gaagatgccgtgtacttccaggaccagtcgaagcggaaggaaacacggatgatcctcttc
ttcgtgtgttcaaagtgtaatgaaagcttctcagatccatcactaccacaagatgcaaga
ccagagatgtga

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