KEGG   Coniophora puteana: CONPUDRAFT_95536
Entry
CONPUDRAFT_95536  CDS       T03134                                 
Name
(RefSeq) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cput  Coniophora puteana
Pathway
cput03030  DNA replication
cput03410  Base excision repair
cput03420  Nucleotide excision repair
cput03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CONPUDRAFT_95536
   03410 Base excision repair
    CONPUDRAFT_95536
   03420 Nucleotide excision repair
    CONPUDRAFT_95536
   03430 Mismatch repair
    CONPUDRAFT_95536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cput03032]
    CONPUDRAFT_95536
   03400 DNA repair and recombination proteins [BR:cput03400]
    CONPUDRAFT_95536
Enzymes [BR:cput01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CONPUDRAFT_95536
    6.5.1.6  DNA ligase (ATP or NAD+)
     CONPUDRAFT_95536
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CONPUDRAFT_95536
DNA replication proteins [BR:cput03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CONPUDRAFT_95536
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CONPUDRAFT_95536
DNA repair and recombination proteins [BR:cput03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CONPUDRAFT_95536
   NER (nucleotide excision repair)
    Other NER factors
     CONPUDRAFT_95536
   MMR (mismatch excision repair)
    Other MMR factors
     CONPUDRAFT_95536
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C eIF-3c_N Salp15
Other DBs
NCBI-GeneID: 19211703
NCBI-ProteinID: XP_007763452
JGI: Conpu1_95536
UniProt: A0A5M3N7B4
LinkDB
Position
Unknown
AA seq 834 aa
MIPVRVCPRLALHLRFMRRQQSLGKFFAMPRNAKPAPPQQSSLAEAWGKKRKPEKPVEKE
PASPKPDDMQVDEPTESAANTDKKRSKSPSPSLKNSSPRPSKPKRRRVVESEEDEPRSSQ
SHKPSSRTSSPKLKRKTKANPAAASPPPATSEDPESAASAGEEDANDEGEEELSDMDDDA
AQKNAEAALKLKNEVDVKSWKVGEPVPYAALAHAFSMIEATTKRLEKTHILTTFFLLVIQ
RSAKGDTNSLLQTVYLCINRLSPDYIGIELGIGESLLIKAISESTGRSLATVKADLKKEG
DLGLVALNSKNSQKTLFKPKPLTLPFVFSKLKEIALSTGHSSQSKKVSIITKLLAACQDV
EAKYIIRSLEGKLRIGNAERTVLVALAHAAVLAEKEQAGKKWSSEKLTGRLEEGTHIMKS
VYSELPTYDLVIPALLEDGIDKLKEKCKLTPGVPLKPMLAKPTKAIGEVLDRFENKRFTC
EYKYDGERAQVHKLEDGTVAVFSRNSEDMSKKYPDLVEQLPHCIKPTTKTFVLDAEAVAI
EKATGKLMPFQELSRRKRKDVKIEDIQVRVCLFAFDLLYLNGEPLMQKSLGERRELLREH
FQVVPGEFDFAKSSDGETTDEIQTFLEESVKDGCEGLMVKMLETDASYYEPSRRSVNWLK
LKKDYLAGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACYDADAEEYQTICKIGTGFSEEA
LQQHWDTLRPLEMEKLRGDLKAGGAKPDIWFEPKIVWEVLTADLSLSPVYTAAQGLVEER
GISLRFPRFLRVRDDKSADDATGPEQVAEMYERQALAQSKGNKKGKGGDGDDFW
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgatccctgtccgcgtgtgtccacgccttgccctccacctcaggtttatgcgaaggcag
caatccttaggaaagttctttgctatgccccggaatgccaaaccagcccctccccagcag
tccagcctcgccgaggcctggggcaagaaacgcaagccggaaaaacctgttgagaaggaa
cctgcttcccctaagccggatgacatgcaggtagatgagcctacggaatccgccgcgaac
acagacaagaagcggtcaaagtctccgtcacccagtcttaagaactcgtctcctcgccct
tctaaacctaaacggcggagagttgtcgagtccgaggaggacgagcccagatcaagccag
tcacataagccatcttcacgaacatcctctccgaaattgaagaggaaaacgaaagccaac
ccggcggccgcatcacctccccctgccacgagcgaggaccctgaatcagctgcaagtgca
ggtgaggaggacgcgaacgatgagggcgaggaagagctttccgacatggatgatgatgct
gcgcagaagaacgctgaagctgccctaaagctcaaaaatgaggtcgacgtaaagagctgg
aaggtcggagagcctgtgccctatgctgcactggcgcatgcattctctatgatcgaggcg
acaacgaaacggctggagaagactcatatcctgaccacattcttcttacttgtcattcag
aggagcgcaaaaggagacacgaactcccttctgcagactgtatatctgtgcatcaacaga
ctgagtcccgactacattggcatcgagctgggcataggcgaaagtttgcttatcaaagcc
ataagtgagtcaacaggacgaagtttggctaccgtcaaagcagacttaaagaaggaaggt
gatcttggactggtggcattgaactcaaagaatagccaaaagacattattcaagccaaag
ccattgaccctcccttttgtgttctcaaagctgaaggagattgcactgtcaacaggacat
tcgtctcaaagcaagaaggtctctatcattacgaaactcctggccgcttgtcaagatgtg
gaggcaaagtacatcatccgaagcttggaaggcaaacttcggattggtaatgcggaacga
actgttcttgttgccctggctcatgccgccgttttggctgagaaggagcaagccggcaag
aagtggagctcagagaagctcactggacggctggaggagggtacccatatcatgaagagc
gtttacagcgaactgcctacatatgatcttgtaataccagcgctgcttgaagacggtatc
gataagctcaaggagaagtgtaagctaactcctggagtgccactgaaaccgatgttggcc
aaacccaccaaagcgatcggggaggtcttggaccgcttcgagaataagcgcttcacatgc
gaatacaaatatgatggcgagcgcgctcaggttcacaaacttgaggatggtactgtcgcg
gtgttcagtcggaactcggaggacatgagcaagaagtaccctgatctagtcgaacagctg
cctcattgtatcaaacccaccacaaagacctttgtccttgatgcagaagctgttgctatc
gagaaggcaaccggaaagctcatgcccttccaggagctcagcaggcgtaagcgaaaggac
gttaaaattgaagacatccaagtccgagtctgcctctttgccttcgatcttctgtacctg
aacggagagcctttgatgcaaaagtcccttggtgagcgccgggaactgctccgcgagcat
ttccaggttgtccctggagagttcgatttcgcaaaatcttcggacggggaaacgaccgat
gaaatccagacattcctagaagagagtgtgaaggatggatgcgaggggctcatggtcaag
atgctcgaaaccgatgcaagctattatgagccaagtcggcgcagcgttaactggttaaag
ctcaagaaagactatcttgccggagtcggagactccctcgatctcgtcgtcgtgggcggc
tattacgggaagggcaagcggacgaacgtatacggcgctttcctacttgcatgttacgat
gccgacgcggaagagtaccagacgatatgtaagatcggcacaggcttcagcgaagaggcg
ctgcagcaacattgggatacgctacgacctttagagatggaaaaactacgcggagacttg
aaggcgggtggtgcgaaacccgacatctggtttgagccaaagatcgtttgggaagtcttg
actgcggacctcagtttgagtcccgtatacacggctgctcaaggcctcgtggaggaaaga
ggaatctcactacggttccctcggtttcttcgggttagggacgacaagtcggccgatgac
gctacaggcccagaacaggtggcagagatgtacgaacgtcaagcgctggcacaaagcaaa
ggcaataagaagggcaaaggtggggacggagacgacttttggtaa

DBGET integrated database retrieval system