Cryptosporidium parvum: cgd1_2600
Help
Entry
cgd1_2600 CDS
T00168
Name
(RefSeq) transcription factor TAF5p, TBP associated protein involved in transcription
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
cgd1_2600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpv03021
]
cgd1_2600
03036 Chromosome and associated proteins [BR:
cpv03036
]
cgd1_2600
Transcription machinery [BR:
cpv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
cgd1_2600
Coactivators
SAGA/TFTC/STAGA complex
cgd1_2600
Chromosome and associated proteins [BR:
cpv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
cgd1_2600
STAGA complex
cgd1_2600
TFTC complex
cgd1_2600
SAGA complex
cgd1_2600
SLIK complex
cgd1_2600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
TFIID_NTD2
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SCAP
Ada3
Motif
Other DBs
NCBI-GeneID:
3371690
NCBI-ProteinID:
XP_628086
ApiDB_CryptoDB:
cgd1_2600
UniProt:
Q5CSI1
LinkDB
All DBs
Position
1:570077..572338
Genome browser
AA seq
753 aa
AA seq
DB search
MSNQQYSLNNNVFQNFQRQISSQNQSSSEQISSQSSTYTNQMVNNNISLMKTFVPHTQNG
VENDGSITQVIKYLRKNGYIETIDTLLFEMNENDRKLKINSLENEMTDSEVENLINFTRK
IDNIDTQVISDKYSKFRNWILNSLSSVREELISVCFIVFVNICYILYKNSSIERYRNFLN
KFSDDFSLSKYREAVTLLRNSSDLGYLKNAELLKPFFGSKFHIILNRTSISLLNNFLLSH
CDTLILGIMQEKLVIHAFDHKTNNNDVTLTSRNEELGCLKEVGNFQIGELYSEDSLFIEF
NSKNNQKNNTYGDISVVAKDASKVLETDMSGKGYSQSNSIINWGLHPENYSGIISKENEM
KKSKFNRFDDEITEEIKNVEIEFNPINDSNNSFTFKYKKHLYEEVSNRKFVDSTHLPSII
CSSLECSNCNEIIDMNISHNHEVGAYCTDDGCIQVFDIENPESKIEPIWIHRNRVQCVRF
HPWNPEFLLSAGIDSIIKLSIITKDQEPTLYQLVTFSGHSTNSCIWDLSWDDHGISFISG
SSDQSARLWCTSRTYPIRIFTGHFGDVRSVSIHPNSSITVTGGSDNQIIIWDVRTGKKEG
TIHNRKVMSGIINQVKFSHNGYLLASSSINNQATRFYSQNQLIVPIWDIRKLCNSNRATE
FYQLCQFPNDTIDSKKQTFVKSLDFSFGSRVIASATNSGIVSIWDTNVETSFNQTDNPNL
VNNSAQIYKLKNSSIKSLKFLSRNLLSISSVKL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcaacaatattctcttaataataatgtatttcaaaactttcaaagacaaatt
tcttctcaaaatcaaagttcttctgagcaaatatcatctcaatcttcaacttacactaat
caaatggttaacaataatattagtttaatgaaaacgtttgtgcctcatactcaaaatggt
gttgaaaatgatggtagtattacacaagttattaaatacttaagaaaaaatgggtatatt
gagacaattgatactttgctatttgaaatgaatgaaaatgatagaaaattaaaaattaat
tctcttgagaacgagatgactgattctgaagttgaaaatttaattaattttactaggaaa
atagataatattgacactcaagtgatttcggataaatattccaagttcagaaattggatt
ctgaattcgctatcttctgttcgagaagaactcatttctgtttgttttattgtttttgtt
aatatctgctatatcttatacaagaactcatctattgagagatatagaaacttcttaaat
aagttttcagatgatttttcgctatctaaatatagagaagctgtcacattattaagaaat
tcaagtgatttgggttatttaaaaaatgcagaattgttgaaaccattttttggatcgaaa
tttcatatcatcctaaaccgaacatctatttcattattgaataacttcttattgtcccat
tgtgatactctaattttaggaattatgcaagagaaattggttattcatgcttttgatcac
aagacaaataataatgacgttacgcttaccagcagaaatgaagaattgggttgtttgaag
gaagttgggaattttcagattggcgagctttattctgaagactccttattcattgaattt
aactcaaaaaataaccaaaaaaacaatacttatggcgacatatctgtagttgcaaaagat
gcatcaaaagtacttgaaactgatatgtcaggtaaaggctattcccaaagtaattctatt
atcaactgggggcttcatcctgagaattacagtggaataatttccaaagaaaatgaaatg
aaaaaatccaaatttaatcgatttgatgacgaaattacagaagaaattaaaaacgttgaa
atagaattcaatcccattaacgattcaaacaactcttttacgtttaaatataaaaaacat
ttatatgaagaagtatcaaatcgaaaatttgttgattctacccatcttccctctataatt
tgtagcagtttggaatgctcaaattgtaatgaaataattgacatgaatatttcacataac
catgaagttggcgcatattgtaccgatgatggctgtatacaagtttttgatatagaaaat
ccggaatcaaagattgaacctatatggatccatagaaatagagtacagtgtgtaaggttt
cacccatggaatccggagtttttattatctgctggaatcgacagtattattaaactttca
attattaccaaagatcaagaacccactttatatcaactagttacattctctggacattca
acaaattcttgtatttgggatctcagctgggatgatcacgggatttcctttattagtggc
tcaagcgaccaaagtgcaagattatggtgtacatcaaggacttatccaattcgtatattt
acaggtcactttggagatgttagatcggtgtcaatacatccaaactcttctattactgta
actggtggcagcgataatcaaattattatttgggatgtacgtacaggaaagaaggaaggc
acaattcataacagaaaagttatgtcaggaattattaatcaggtcaaattcagccataat
ggatatttgttagcttcctcttcaattaataatcaagctactcgcttttattctcaaaac
cagcttatagtaccaatttgggatattcgtaaattgtgcaattctaatagagctactgaa
ttttatcagctttgtcaattcccaaatgatacaatagattcaaaaaaacaaacgtttgtt
aaatcgcttgatttttcatttgggagccgtgtcattgcatctgcaactaatagtggtata
gtttctatctgggatacaaacgtagagacaagttttaatcaaacggacaatccaaactta
gttaacaattctgcgcagatttataaattaaagaactcaagtataaaaagcctcaaattc
ctatctagaaatttactatcaatatcgtctgtaaagttatag
DBGET
integrated database retrieval system
