KEGG   Cryptosporidium parvum: cgd1_2730
Entry
cgd1_2730         CDS       T00168                                 
Name
(RefSeq) Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x RRM domains
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    cgd1_2730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpv03041]
    cgd1_2730
Spliceosome [BR:cpv03041]
 Complex A
  U2 snRNP components
   U2 related factors
    cgd1_2730
 Complex B
    cgd1_2730
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 RRM_5
Other DBs
NCBI-GeneID: 3371720
NCBI-ProteinID: XP_628096
ApiDB_CryptoDB: cgd1_2730
UniProt: Q5CSH1
LinkDB
Position
1:complement(596450..598531)
AA seq 693 aa
MIDEGASELEVVKVGEEEVGYNKEVEEEEEGRSLSTFSDKEVESKDLASLEKSGPTEAGE
EGYASANVTELSVPDPNLNGHPTGDVSEDDVSSYENDRKLINGKVKDLSIGSRTEEGLLT
GGEAASEEGEEPGETETVTDNSASGKSDKQGIKGIPRIPRRRSRSPSLEEGQSVEEFSKI
SGSFSPHNSGTIDSSHKKRRKRANSGWDAQSNNSCNSPNLAPVPGNPHGHFSGVSGTLTG
NNGVVTNSNSNLGMGPGHSTIGSGNSIGANSTVSSGTTTGAGPRQSSQISRIYVGSLDYS
LNEADLKQVFGSFGPIVNIDMPREGNRSKGFCFIEYTSQESAEMALATMNRFVLKGRPIR
VGRPTNAASSNGNQSGSGGIGGGGSGNVINPNIAVFNNNHITHQNHQIQSETTHGTGIAT
HSQNRIYIGSVPYSFTTDDLRHIFKTFGVILSCQLIPSIEKPGTHRGYGFIEFGTADQAK
LAIETMNGFEVGGKQLKVNVATALKPQVGGGGGGTQSGVSGATVGQIPMINPIQNVIPSQ
MPSMGIPHQMVLPSMMQMPNVAPPPLPIYQQPPGYPLSNGPAPYQIPGAISGSASSTNII
LLTNMVGPDEIDDELKEEVKIECSKYGKVYDVRIHVSNNISKPSDRVRIFVVFESPSMAQ
IAVPALNNRWFGGNQVFCSLYNTERYYSSFLDD
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgattgatgaaggagcttctgagcttgaagttgtgaaggttggagaagaagaagttggg
tataataaagaggttgaggaggaggaggaaggccgtagtcttagcactttctcagataag
gaagtagagtccaaggacctcgcaagtctcgaaaaatcgggcccaactgaagctggggaa
gaaggctatgcatctgccaatgttacggagctttcagtaccggatcctaacttaaatggg
catcctactggggatgtatcagaggatgatgtaagtagttacgaaaatgataggaaatta
ataaatggtaaggtaaaggatctgagtatcggatctcgcaccgaggagggtctgttgaca
ggtggagaagctgcctctgaagagggagaggagcctggcgaaactgagactgttaccgat
aattctgcctctggaaaatcagacaaacagggaataaagggtatccctaggatacctaga
agaaggtctaggagtcctagtctggaggagggtcagagtgttgaggagtttagcaaaatc
agcggttccttttcgcctcataattcaggtacaattgactcaagccataagaaacgcagg
aaaagagcaaattcgggatgggacgctcagagcaacaatagctgcaactccccgaactta
gctcccgtaccaggaaatcctcatggccatttctcaggggtatctggtaccttaactgga
aataatggagttgtaactaactcgaattctaatttgggtatgggtcctggacattctacc
ataggatccggaaatagtatcggagcaaactctactgtgagctcaggtacaacaacaggg
gcggggcccaggcaaagcagtcagatatctcgcatctatgtcggttctctggattattca
ctgaacgaggcggatcttaagcaggtttttggctcattcggcccaatcgtgaatattgac
atgcccagagaaggcaaccgctctaaaggcttctgctttatcgagtacacatcacaggag
tcagcagagatggctttggccacaatgaacaggtttgtactaaaaggaagaccaattagg
gtaggcaggcctactaatgcggcatctagtaatggtaatcaatccggaagcggaggcata
ggaggagggggctcagggaatgtcattaatccaaatattgctgtttttaataacaaccat
attacccatcaaaatcatcaaattcaatcagaaactactcacggaacaggaattgcaact
cattcacaaaacagaatttatattggttctgttccctactcttttacaactgacgatctg
aggcatattttcaagacttttggtgttatccttagttgccaattaatcccttcaatagaa
aagccaggtacccatcgtggctatggctttattgaatttggtactgcagatcaagcaaaa
cttgcgatagaaactatgaatggctttgaagtaggcggaaaacaactcaaagttaatgtt
gcaactgcgcttaaacctcaagtaggcggtgggggcggaggaactcaatcaggagtttct
ggagccacagttggccaaatacctatgattaatcctattcaaaatgtgataccctcccaa
atgccctcaatgggtattcctcatcaaatggttttaccttcaatgatgcaaatgcctaat
gtggctccgcctccactcccaatataccaacaaccacctgggtatccattgagcaatggg
cctgcgccataccagatccccggtgcaatttcaggatctgctagtagcaccaacattatt
ctgcttacaaatatggttggccctgatgaaattgatgatgaacttaaagaggaggttaaa
atagagtgcagtaaatatggaaaagtttacgacgttcgtatacatgtttcgaacaatatt
tctaaaccttcggatagagtacgtattttcgtcgtatttgagtcgccatccatggcacaa
attgctgttcctgcacttaataaccgctggtttggcggcaaccaggttttttgcagcctt
tacaatactgaaagatactactcctccttcctcgatgactaa

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