Cryptosporidium parvum: cgd1_2770
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Entry
cgd1_2770 CDS
T00168
Name
(RefSeq) RNA polymerase 1 beta subunit
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
cgd1_2770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpv03021
]
cgd1_2770
Enzymes [BR:
cpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
cgd1_2770
Transcription machinery [BR:
cpv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
cgd1_2770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
3371722
NCBI-ProteinID:
XP_628100
ApiDB_CryptoDB:
cgd1_2770
UniProt:
Q5CSG7
LinkDB
All DBs
Position
1:complement(605276..609121)
Genome browser
AA seq
1281 aa
AA seq
DB search
MEYQTRDRLLSAVWPHIESFNTFLSVGLKNIVKNLPKIYVDSGFIQDDCELNAAYSPAEY
LRIGVTSAKIGKPIFGNSESSGTKLTPQHARNGHISYSAPLWLEFEGYNSSLDTVSKHSI
YAGTIPIMVKSSSCHLFGLGTKELVEKGEDPNEVGGYFIINGNERVIRYVIQQRCNYPIG
LKRPRFATFDSFGSEYAVLMRSLRDDGTSTANYLYGTSDHQCIYRVLLNRQEWLIPFWPL
LMAVGSIYDSNVLRSKILQYCNPKDENLFNTINMLTLEWGLDNSVGVDAEFNSVSFGNKG
PGDTDILENRYLHQIGRLVWEGVAFHLPPGSLLQEAGRFLIDNYVLVHLEEWNAKLECLI
LMFIKLIKLQLNEIREESIDSFAYQELLSPGNLYSALFKDAIFSFLQKIRSTYLIEIRSK
SGEKNKESKNGVNLLRDTAYFKSVLSKNISMIPKRLQYFMATGNVKTTQLDLQQLSGWTV
VADRLNFNRFLSHFRAVHRGQFFTTMKTTDVRKLTGETWGFLCPVHTPDGEPCGLLLHLS
QDCIPVTQWDSQETLRRLRNYLISHGISCDDGLGSLSSTWGIESSSRDDLYSPDLTKSIP
VMLDGRVLFHIPREDFMVWENKLRTLKWQTNPSVLPVHAEIACVPPDSGMFSGIYIFTAP
GRLVRPIMHLETAQVDWIGPLGQPWMNIGVTEEETRKSTKLLEIQKRLIGISDTESEEQL
KNDLKALKKLIKDNDRVLSSVPVNYTHMELHPSTILSVTASLIPYAHHNQSPRNMYQCQM
LKQTMGTPCLNHPYRTDNKMYRLLTPQEPTIITKGYSSFGFSEYPTGTNAIVAVMSYSGY
DMEDAMILNKSSYDRGMFHACVYKTKIISAAPPSATKKSDAESYFFHNIGPDGELVVKEL
SADGLPNIGQRLTKGSPICRVERIGSGGGPSNATIQTYHDDEVAFVEKINRIASGISIEL
QQDSLSGGGGDGASSSSGYGEKVSIKLRIVRNPMVGDKFASRHGQKGILSMLWPQENMPF
SESGMVPDILFNPHGFPSRMTIGMLLESMGGKAACIHGARSLDATPFNINISDDLSRSEE
NCEDDKAGEKTTVDYFGKALERAGFQYYGCEPLYNGMTGVELPCHIFMGVIYYQRLRHMV
ADKAQVRATGPIDALTRQPVKGRKRHGGIRFGEMERDSLISYGVSSILVDRLLICSDEHR
AYVCPKCGLIISSISKRAMAQSMSSSKLSNCIPPIAVCRVCKSPCRIITLPYIFRYLSNE
LAAMNIVIRLHLQQEDVPISN
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggagtaccagactcgggatagactactttctgcagtttggccgcacattgaatcattc
aatacattcctttctgttgggttaaaaaatattgtgaagaatttacccaagatttatgtg
gactctggatttattcaagatgattgcgagctaaatgcagcttatagcccagctgaatac
cttagaataggagttacatctgcaaaaataggaaagcctatttttggtaattctgaatca
tctggtacaaagctgactcctcagcatgccagaaatggacatattagttacagtgctcca
ctatggctagaatttgaaggttataattcatctttagatactgtttcaaagcatagtatt
tatgctggaacaattccaatcatggttaagagttcaagttgccatttatttggtcttggt
acaaaggaattggttgaaaaaggcgaagaccctaatgaggttggtggctactttattatc
aatggtaatgaaagagttattaggtatgtaattcaacaaagatgtaattatccaattgga
cttaaacgtccaaggtttgcgacctttgattcatttggctcggaatatgccgttttaatg
aggtcattaagagacgatggaacttctacagcaaactatctatacggaacgtctgatcat
caatgtatttacagagttttattaaatagacaggagtggctaattccattctggccttta
ttaatggcagtaggatcaatttatgactcaaatgtgctcaggagcaagatcctccaatat
tgtaatccaaaagatgaaaatttattcaacacaattaatatgcttactcttgaatggggg
cttgataactcagtcggtgttgatgcagaatttaattctgtatcatttggaaataagggg
cctggagatacagatattttagaaaatcgatacttacatcaaataggtagattggtatgg
gagggcgtagccttccatcttcctccaggtagccttttacaagaggcagggagattctta
atagataattatgtgttagtccatttggaagagtggaatgcaaaattggaatgccttatt
ttaatgtttataaaactaatcaaacttcagcttaatgaaattcgtgaagagtctatagat
tcttttgcgtatcaagaattattatctccaggaaacctatactcagcactatttaaagat
gcaattttttcatttctacaaaagataaggtctacatatttgattgagataagatctaaa
agtggtgaaaagaataaagagagtaaaaatggtgttaacctgcttcgagatacagcatac
tttaaatcagttttatcaaaaaatatttccatgatacctaagcgtctccaatattttatg
gcaacaggtaatgtgaaaaccactcaattggaccttcaacaactatcaggatggactgtt
gttgcagatagactaaattttaatagatttctatcccattttagagctgtacatagagga
cagttttttaccactatgaagactacggatgtcagaaaattaacaggtgaaacatgggga
tttctttgtccagtacatactcctgacggtgagccatgcggtttacttctccatctttcc
caggattgtattcctgtgactcaatgggattcacaagaaactctcagacgattaagaaat
tatttaatttcacatggtatttcatgcgatgatgggctgggatctctttcttcaacttgg
ggtatagagtcatcttcaagagatgatttatattcaccagatttaacaaaatccattcct
gtaatgctagatggtagagttttatttcatatcccgagagaagattttatggtatgggaa
aataaattaagaaccttaaagtggcaaacaaacccctctgtattaccggttcatgcagaa
atagcatgtgttccaccagattctggtatgttttcaggaatttacattttcaccgctcct
ggaagacttgtaagaccaattatgcaccttgagactgctcaagtagactggattgggccg
cttggccaaccatggatgaatattggtgtaacggaagaagagactcgtaaatcaacaaaa
ctccttgaaattcaaaaaagattaattggtatttcggatactgagtctgaagaacagcta
aaaaacgaccttaaagctttaaagaaactaattaaagataatgacagagtgctttcatct
gtaccggttaactacactcacatggagctccatccatcaacaattctatcagttactgca
agccttattccttatgctcaccataaccaaagtccaagaaatatgtatcagtgccagatg
cttaaacaaacaatgggtactccttgccttaaccacccatatagaaccgacaataagatg
tataggcttttaactcctcaagagccaactattattactaaaggatattcatcctttggt
ttttctgaatatccaactggaacaaatgcaatcgttgctgtaatgtcatattcaggttat
gatatggaggatgctatgattcttaacaaatcatcttatgatagaggaatgttccatgcc
tgtgtctataaaaccaaaatcatttcagcagctcctcctagtgctacaaaaaagagtgat
gcagaaagctacttctttcataatattgggccagacggtgagctagttgttaaagagctt
tcagcagatgggcttcctaatattggccaaagacttacaaaaggctcaccaatatgtagg
gttgaacgtataggttctggagggggcccttccaatgcaactattcaaacttatcatgac
gatgaggttgcatttgtcgagaaaattaataggatagctagcgggatttctattgaactt
caacaagattctttaagtggagggggaggagatggggcttcaagttcttctggttacgga
gaaaaggtgtctatcaaactaagaatcgtaagaaatcctatggttggtgataaatttgcc
tctagacatggccaaaaaggtattctttcaatgctttggccacaagaaaacatgccattt
agcgaatctggtatggttcctgatattctattcaatccgcatggttttccttctcgtatg
actatcggtatgctcttagagtctatgggaggaaaagcagcttgtattcatggagcaaga
agtttggatgcaactccattcaacattaatatttctgatgatctttcaagatctgaagag
aattgcgaggatgacaaagcgggtgaaaagactactgtggactactttggtaaagcttta
gaaagagcaggtttccaatattatgggtgcgaaccactttataatggaatgacgggagta
gagctcccatgtcatatctttatgggagttatttattatcaaagacttcgtcatatggtt
gctgataaggctcaagttagagcaaccggtccaattgacgcgttaactagacagcctgtt
aagggaagaaaaagacatggtggtattagatttggagagatggaaagagactctctaatt
tcgtatggtgtcagctctattcttgttgataggttacttatttgctcagacgagcacaga
gcatatgtttgtccaaaatgcggacttataatctcttccatttcaaagagggctatggca
caatcaatgtctagtagcaagctttcaaattgcatcccacctattgcggtttgtagggtt
tgtaaatctccctgcagaattattacgcttccatatatctttagatatctttcaaatgag
cttgcagcaatgaatatagttattcgcctacatctccaacaagaggatgttcctattagt
aattaa
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integrated database retrieval system