KEGG   Cryptosporidium parvum: cgd1_330
Entry
cgd1_330          CDS       T00168                                 
Name
(RefSeq) CDC48 like AAA ATPase ortholog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
cpv  Cryptosporidium parvum
Pathway
cpv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    cgd1_330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpv03019]
    cgd1_330
   03009 Ribosome biogenesis [BR:cpv03009]
    cgd1_330
   04131 Membrane trafficking [BR:cpv04131]
    cgd1_330
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpv04147]
    cgd1_330
Messenger RNA biogenesis [BR:cpv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     cgd1_330
Ribosome biogenesis [BR:cpv03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    cgd1_330
Membrane trafficking [BR:cpv04131]
 SNARE
  SNARE associated proteins
   Others
    cgd1_330
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    cgd1_330
Exosome [BR:cpv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   cgd1_330
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_5 CDC48_2 AAA_2 AAA_33 AAA_22 AAA_14 TIP49 RNA_helicase Mg_chelatase nSTAND3 NPHP3_N AAA_17 AAA_28 ATPase_2 IstB_IS21 AAA_18 Parvo_NS1 AAA_7 NACHT AAA_24 ABC_tran Viral_helicase1 DUF815 Sigma54_activat ResIII Sigma54_activ_2 Zeta_toxin Vps4_C
Other DBs
NCBI-GeneID: 3371378
NCBI-ProteinID: XP_627893
ApiDB_CryptoDB: cgd1_330
UniProt: Q5CT24
LinkDB
Position
1:complement(73007..75469)
AA seq 820 aa
YRNLEEMNVDGENQIPKSEEVQMTNGDSSANNTSPGQIEKKRAPNRLLVDDAINDDNSVV
CLSPAKMEELKLFRGDTILLKGKKRRDTICIVLVDPDLEEGKIRMNKVVRKNLRVKLGDT
VSVLECGDVPYGKRIHVLPFDDCLEGITGNLFETYLKPYFLEAYRPVKKGDAFLVRGGFR
PIEFKVVGVDPEEYCIVAPDTVIHCEGDPIKREDEEKMDDIGYDDIGGCRKQMAQIREMI
ELPLRHPGLFKALGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGPEVMSKMAG
EAEGNLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKGRGQ
VVVIAATNRPNSIDPALRRFGRFDREIDIGVPDDNGRLEIIRIHTRNMKLAKDVKIDDIA
ANTHGFVGADLAQLCTEAALCCIREKMDVIDMEDETIDAVILDSMAVSQDHFNSALGVCN
PSSLRETVVEVPNIKWDDIGGLEEVKRNLQEMILYPIEHPEKFERFGMSPSRGVLFYGPP
GCGKTLLAKAVASECSANFISVKGPELLTLWFGESEANVREVFDKARAAAPCVLFFDELD
SIGTQRGSSMGDAGGAGDRVMNQLLTEIDGVGVKKNLFFIGATNRPEILDEALLRPGRLD
QLIYIPLPDLPARVSVLQAILRKSPLSKNVPISFIAQKTEGFSGADLAELCQRAAKAAIR
DAIAAEELKKASGDDSAMKIEDEVDSHIYEIGRKHFEEAFAGARRSVSITDLAKYDQFRM
KFDPVYVTQSGGEGFTIDWPDSTHAQYSAPIDDDADDLYS
NT seq 2463 nt   +upstreamnt  +downstreamnt
tatcggaatctagaagaaatgaatgttgacggggaaaatcaaattccaaagtcagaggaa
gttcaaatgactaatggtgattcctctgctaataatacgtcaccaggtcaaattgaaaaa
aagagagctccaaatagattgctggttgacgatgctattaatgatgataattctgttgta
tgtttaagtccagcaaagatggaggagttgaaattatttagaggtgatacaattttatta
aagggtaagaaacgtagagatacaatatgtatagtattggttgaccctgatttggaggaa
ggtaaaattcgtatgaacaaggttgtcaggaagaacttgagagttaagcttggagataca
gtttctgttcttgagtgtggagatgttccatatggtaagaggattcatgttttgccattt
gatgactgtttggaaggaattactggtaatctttttgagacatatttgaaaccgtatttc
ctagaggcttacagacccgtcaaaaagggagatgcttttttggtaagaggcggattccgt
ccaatcgagttcaaggttgttggagtagatccagaagagtactgcattgtagctccagat
actgtaattcactgtgagggtgatccaatcaagagagaagatgaggaaaaaatggatgat
attggatatgacgatattggaggctgcagaaagcaaatggctcaaatcagagaaatgatt
gagcttccattacgtcatccagggctattcaaagctttaggagttaaacctccgagagga
gtcctattatatggacctcctggttctggtaagactcttattgcaaaggcagtagcaaat
gaaactggagcattcttcttcctgattaatggaccagaagttatgtcaaaaatggcagga
gaagcagagggaaatttacgtagagctttcgaggaggcagaaaagaactctcctgcgatt
attttcattgatgaaattgattccattgctcctaagagagagaagactaatggagaggtc
gaacgtcgtgttgtatctcagttattaactcttatggatggattgaaagggaggggccaa
gttgttgttattgcagctacaaatagaccaaattctattgatccagcattgagaagattt
ggcagattcgacagagaaattgatattggagtcccagatgataatggtagacttgaaatt
atcagaatccatacaagaaatatgaagctagctaaggatgtcaaaattgatgatattgca
gctaatacccatggttttgttggagcagatttggcccagctatgtactgaggcggctctc
tgttgtattcgtgagaaaatggatgttattgatatggaagatgaaacaattgacgcagtt
atcttggattctatggccgtcagccaggatcacttcaactctgcattgggcgtttgcaac
ccatcttctttgagagaaactgttgtagaggttccaaacattaaatgggatgatattggt
ggtcttgaagaagtcaaacgcaacttacaagaaatgatactctaccctattgagcatcct
gagaagttcgagcgttttggaatgagtccttctcgtggagtcttattttatggtccacct
ggttgtggtaagactttacttgcaaaagctgttgcctctgaatgctctgcaaactttatt
tctgtcaaaggacccgaacttcttaccttatggtttggtgagagtgaggccaacgttagg
gaggtatttgataaggccagagctgctgctccttgtgtactattcttcgatgagttagac
agtattggcactcaaagaggaagcagcatgggagatgctggtggtgctggagacagagtt
atgaatcaacttcttactgaaatcgatggtgttggtgttaagaagaatctcttcttcatt
ggagctacaaatagaccagagatccttgatgaggctttattgcgtccaggaaggcttgac
cagttaatttacatccctctcccagatcttcctgccagagtctctgttctacaagctatt
cttagaaaatctcctctttcaaagaacgttcctatatcttttatcgctcagaaaactgaa
ggattctcaggcgctgaccttgcagagctttgccaaagagcagcaaaggctgcaattaga
gatgcaattgctgctgaagagctaaagaaggcatctggggatgatagtgctatgaaaatt
gaggatgaagtagatagtcatatttacgaaatcggaagaaaacattttgaggaagcattt
gctggagcgagaagatctgtaagcattaccgaccttgccaaatatgatcagtttagaatg
aagtttgaccctgtgtatgtcactcaatccggaggagaaggatttacaattgactggcca
gattcgacccatgcccaatactctgctcccattgatgacgatgctgatgatttatattca
taa

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