Cryptosporidium parvum: cgd1_330
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Entry
cgd1_330 CDS
T00168
Name
(RefSeq) CDC48 like AAA ATPase ortholog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpv
Cryptosporidium parvum
Pathway
cpv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
cgd1_330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd1_330
03009 Ribosome biogenesis [BR:
cpv03009
]
cgd1_330
04131 Membrane trafficking [BR:
cpv04131
]
cgd1_330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpv04147
]
cgd1_330
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
cgd1_330
Ribosome biogenesis [BR:
cpv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
cgd1_330
Membrane trafficking [BR:
cpv04131
]
SNARE
SNARE associated proteins
Others
cgd1_330
Autophagy
Aggrephagy
Other aggrephagy associated proteins
cgd1_330
Exosome [BR:
cpv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
cgd1_330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_2
AAA_33
AAA_22
AAA_14
TIP49
RNA_helicase
Mg_chelatase
nSTAND3
NPHP3_N
AAA_17
AAA_28
ATPase_2
IstB_IS21
AAA_18
Parvo_NS1
AAA_7
NACHT
AAA_24
ABC_tran
Viral_helicase1
DUF815
Sigma54_activat
ResIII
Sigma54_activ_2
Zeta_toxin
Vps4_C
Motif
Other DBs
NCBI-GeneID:
3371378
NCBI-ProteinID:
XP_627893
ApiDB_CryptoDB:
cgd1_330
UniProt:
Q5CT24
LinkDB
All DBs
Position
1:complement(73007..75469)
Genome browser
AA seq
820 aa
AA seq
DB search
YRNLEEMNVDGENQIPKSEEVQMTNGDSSANNTSPGQIEKKRAPNRLLVDDAINDDNSVV
CLSPAKMEELKLFRGDTILLKGKKRRDTICIVLVDPDLEEGKIRMNKVVRKNLRVKLGDT
VSVLECGDVPYGKRIHVLPFDDCLEGITGNLFETYLKPYFLEAYRPVKKGDAFLVRGGFR
PIEFKVVGVDPEEYCIVAPDTVIHCEGDPIKREDEEKMDDIGYDDIGGCRKQMAQIREMI
ELPLRHPGLFKALGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGPEVMSKMAG
EAEGNLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKGRGQ
VVVIAATNRPNSIDPALRRFGRFDREIDIGVPDDNGRLEIIRIHTRNMKLAKDVKIDDIA
ANTHGFVGADLAQLCTEAALCCIREKMDVIDMEDETIDAVILDSMAVSQDHFNSALGVCN
PSSLRETVVEVPNIKWDDIGGLEEVKRNLQEMILYPIEHPEKFERFGMSPSRGVLFYGPP
GCGKTLLAKAVASECSANFISVKGPELLTLWFGESEANVREVFDKARAAAPCVLFFDELD
SIGTQRGSSMGDAGGAGDRVMNQLLTEIDGVGVKKNLFFIGATNRPEILDEALLRPGRLD
QLIYIPLPDLPARVSVLQAILRKSPLSKNVPISFIAQKTEGFSGADLAELCQRAAKAAIR
DAIAAEELKKASGDDSAMKIEDEVDSHIYEIGRKHFEEAFAGARRSVSITDLAKYDQFRM
KFDPVYVTQSGGEGFTIDWPDSTHAQYSAPIDDDADDLYS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
tatcggaatctagaagaaatgaatgttgacggggaaaatcaaattccaaagtcagaggaa
gttcaaatgactaatggtgattcctctgctaataatacgtcaccaggtcaaattgaaaaa
aagagagctccaaatagattgctggttgacgatgctattaatgatgataattctgttgta
tgtttaagtccagcaaagatggaggagttgaaattatttagaggtgatacaattttatta
aagggtaagaaacgtagagatacaatatgtatagtattggttgaccctgatttggaggaa
ggtaaaattcgtatgaacaaggttgtcaggaagaacttgagagttaagcttggagataca
gtttctgttcttgagtgtggagatgttccatatggtaagaggattcatgttttgccattt
gatgactgtttggaaggaattactggtaatctttttgagacatatttgaaaccgtatttc
ctagaggcttacagacccgtcaaaaagggagatgcttttttggtaagaggcggattccgt
ccaatcgagttcaaggttgttggagtagatccagaagagtactgcattgtagctccagat
actgtaattcactgtgagggtgatccaatcaagagagaagatgaggaaaaaatggatgat
attggatatgacgatattggaggctgcagaaagcaaatggctcaaatcagagaaatgatt
gagcttccattacgtcatccagggctattcaaagctttaggagttaaacctccgagagga
gtcctattatatggacctcctggttctggtaagactcttattgcaaaggcagtagcaaat
gaaactggagcattcttcttcctgattaatggaccagaagttatgtcaaaaatggcagga
gaagcagagggaaatttacgtagagctttcgaggaggcagaaaagaactctcctgcgatt
attttcattgatgaaattgattccattgctcctaagagagagaagactaatggagaggtc
gaacgtcgtgttgtatctcagttattaactcttatggatggattgaaagggaggggccaa
gttgttgttattgcagctacaaatagaccaaattctattgatccagcattgagaagattt
ggcagattcgacagagaaattgatattggagtcccagatgataatggtagacttgaaatt
atcagaatccatacaagaaatatgaagctagctaaggatgtcaaaattgatgatattgca
gctaatacccatggttttgttggagcagatttggcccagctatgtactgaggcggctctc
tgttgtattcgtgagaaaatggatgttattgatatggaagatgaaacaattgacgcagtt
atcttggattctatggccgtcagccaggatcacttcaactctgcattgggcgtttgcaac
ccatcttctttgagagaaactgttgtagaggttccaaacattaaatgggatgatattggt
ggtcttgaagaagtcaaacgcaacttacaagaaatgatactctaccctattgagcatcct
gagaagttcgagcgttttggaatgagtccttctcgtggagtcttattttatggtccacct
ggttgtggtaagactttacttgcaaaagctgttgcctctgaatgctctgcaaactttatt
tctgtcaaaggacccgaacttcttaccttatggtttggtgagagtgaggccaacgttagg
gaggtatttgataaggccagagctgctgctccttgtgtactattcttcgatgagttagac
agtattggcactcaaagaggaagcagcatgggagatgctggtggtgctggagacagagtt
atgaatcaacttcttactgaaatcgatggtgttggtgttaagaagaatctcttcttcatt
ggagctacaaatagaccagagatccttgatgaggctttattgcgtccaggaaggcttgac
cagttaatttacatccctctcccagatcttcctgccagagtctctgttctacaagctatt
cttagaaaatctcctctttcaaagaacgttcctatatcttttatcgctcagaaaactgaa
ggattctcaggcgctgaccttgcagagctttgccaaagagcagcaaaggctgcaattaga
gatgcaattgctgctgaagagctaaagaaggcatctggggatgatagtgctatgaaaatt
gaggatgaagtagatagtcatatttacgaaatcggaagaaaacattttgaggaagcattt
gctggagcgagaagatctgtaagcattaccgaccttgccaaatatgatcagtttagaatg
aagtttgaccctgtgtatgtcactcaatccggaggagaaggatttacaattgactggcca
gattcgacccatgcccaatactctgctcccattgatgacgatgctgatgatttatattca
taa
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