Cryptosporidium parvum: cgd1_3670
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Entry
cgd1_3670 CDS
T00168
Name
(RefSeq) CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX)
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cpv
Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpv03021
]
cgd1_3670
03036 Chromosome and associated proteins [BR:
cpv03036
]
cgd1_3670
Transcription machinery [BR:
cpv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
cgd1_3670
Chromosome and associated proteins [BR:
cpv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
cgd1_3670
SLIK complex
cgd1_3670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
ResIII
HTH_CHD1_Hrp3
CHD1-like_C
DEAD
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-GeneID:
3371517
NCBI-ProteinID:
XP_628179
ApiDB_CryptoDB:
cgd1_3670
UniProt:
Q5CS88
LinkDB
All DBs
Position
1:<815338..>821505
Genome browser
AA seq
2055 aa
AA seq
DB search
MDLDVEFSDSSTEGEFDTLGKCISTEDISPEIISRNQNQNQAQTSSCSRSGRVRKMRYSN
FSNIDNESELSDESLSEFGQTSKMQKTRERSNRSKGGKSRSQSQKSEDLDYVNEEDLYDG
DDEEFMSEDLNNNVDAKRSTDSDDGDEDFYEEPTQKKRSRKPSKTKVSQTSGVKRTVRSS
RKAVNYLSFDDSVSSDSLSQDSDEVEVDAEVETEAGMSVSAQQNVRTIDRVISSRQNPED
PNITEYKIKWMGYSHLHNTWESAESLINEGVSGLRRLENFQKKMAEMLQRRKFMTEDEIE
QEDITFEIQRQLDFDALIPERIVDVYRENDNSGVDQNNAEDRTQLYYFVKWLSCPYDQCT
WESYETLEEHKFLSFIDSFYAQMELVSRFDKNCDYEMRSLALTSFEPYLSTPFYMGIKVK
DMLNQSKNLEKMEIDDPKSSNIQEMKIEYQSNNENEHGNSITEDVKMEIKDSQKLEKIKE
EVENTDESNDEPFQPRTLRDYQIYGLNWMISRFKKNVNILLADEMGLGKTVQTISVVGHC
LYMEKIVAPFLVVVPQSTSDNWLREFKKWLPDANVVLYHGNAYARELIRSYELSTIEMKD
EVDENGNYNENLESKDEVHNYNQKGMQGHARAGTGGNGFFRRCRSRSSKQTRKRYRFDVV
ITTPSILNSQVDCDFLRQIDWYMMIVDEAHQLKNRDSKRFKELHEFGTMYRLLLSGTPLH
NNLEELWSLLHFLNPLRFQNYQEFRLRYPDIENPNVIGPDKQRQLEDLQSELQEYVLRRV
KKDVEKSLPNKVERILRVELSPQQTDMYKSILTRNYDELSKSTGGTKTSLQNICMELKKV
CNHPFLIHRPELDPSQGITVASIQHQLVYGCGKLCLLDKLLSRLREKGSRVLIFSQMVRM
LNIISEFLVLRGFRHQRLDGTMGKELRKKAMDHFNSPNSDDFCFLLSTKAGGLGINLTTA
DTVIIYDSDWNPQNDLQAEARAHRIGQKKQVQIYRLVTKDSIEENILERAKTKMVLDTLV
VQGLNNISTSSSQTQASSSAAASVLAMASQALYPNGKKPGSGGASFSRDELAKILKFGAQ
KLWSKGTNNVPAQSQSGSDSTCGRCTDGQCGEACMHRAVNVDGTQGVENKLKEDENSADL
LEDDKRFASQIDLDQVLADAEEHVHDTQGLADGLLRSFANIADFRYEAPPLIIDSNTGAL
VPLNEKKKEDNEVDFDSKEFWEKTIPEEERLKLIEQNQQNTIITGPRKSAMRDGSLKYRD
DGYTYVGGDNSGSEDGRTGRIGDQGLEADENFGTKGKKQSKKKTKEKSVKKSSGSGSSGK
SRASSSSGGSKKTEVGSSEQIEDVEMDLGSQKDLDKTPESLGEIVPNREEYPLPEHSLQS
REDFEALMLEITSFPHKYNQDDELFPSEINIIYRDISNGVKCVKNGKRARRDPRVLHPKR
RFKLFRSILKFGDPYRRLDDIIIDSRLKGKVEKGTILNESQIIVALCYEKAQKELSSENV
MAASKEEVEIKDEDDVQNNKSNNEATSILEGQSTTDSTIMGGGVPLEVGSMEDFAEENDI
ENNNQVSKTALKKNLLLIGSHRANALELVERIKMLSSLDKLMRECNPGVEKPWKLPTGPL
ARPDRESVKRDEDNENEDDVDDEDEDLDEEEEKEKSFELSNENNLEEKKIEPTNTENENE
KQSTPNGNEFDGNYLKFELPPVLVKSLRTPSWGIPWTLQTDIDILKGIYIYGFSNWTMMS
MDENLSLSCIKRVKFDKLKQRTLRVMKHLHSVMVIGKTARKKRKFIPSSDQEYNDFNKNE
NSSSKRGKKVAKKCEDQNKNGTDLSGHLVNDNSNGDHNKGSIKSSKPLVVGGKKGLPEFV
LECSNMDEKELRRQARTCFNNSNVKPQLLEIKKLFHPSNNMTDSDVVASLKVLLPVVGDE
INEILKLATNEISRNKVHNCLWSYVAKCTVFQPHDIEKIYLSWKGINPPENNTETVTKVN
PDPVIEPEPEPEPEPKPKPENEPKPENELKPENEPKLEHELKPENEPKLEHEPKPENGPG
IESKSEPEPSSSAPY
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atggatttggacgtagaattttcagattcctccacggagggtgagtttgatactttgggg
aaatgtatatctactgaagatattagcccagaaattataagccggaatcaaaaccaaaac
caagcacaaactagtagctgctcaagaagtgggagagttcgtaagatgcgatattcaaat
ttttccaatattgataatgaaagtgaattatctgatgaatctctttctgaattcggccaa
acatctaagatgcaaaaaacacgggaacgatctaataggagtaaaggaggtaaatcaaga
agtcagtctcaaaagagtgaagaccttgactatgtgaatgaggaagatttatacgatggt
gatgatgaagagtttatgagcgaggacttgaataataatgttgatgcaaaaagaagtacc
gactctgatgatggtgatgaagatttttatgaggagccaactcagaagaaacggagcagg
aagccttccaaaactaaggtatcacaaacaagtggtgttaagagaactgtaagaagtagc
agaaaagcagtaaattatttaagttttgatgactcagtttcatctgactcattatcacaa
gattctgacgaggtagaagtagatgcagaggtagagacagaggctggtatgtctgtttct
gcccaacaaaatgtgagaactatagatagagtcatttcaagtagacagaatcctgaagat
cctaatattacggaatataaaattaaatggatgggttattctcatctacataatacgtgg
gaatcagcagaatctttgataaatgaaggtgtttctggcttaagaaggttagaaaacttc
caaaagaagatggctgaaatgcttcaaagacgtaaatttatgacggaagatgaaattgaa
caggaagatattacatttgagatacaaagacaacttgattttgatgctttaattcctgag
agaattgttgatgtttatagggaaaatgataattcaggagtagaccagaataatgctgaa
gatcgaacacaattatattactttgttaagtggcttagttgcccttatgatcaatgcact
tgggaatcatatgagaccttagaagagcataaatttctttcatttattgactcattctat
gctcaaatggagctcgtttccagatttgacaagaactgtgattatgaaatgagatctctt
gctttaacttctttcgagccttatctttcaactccattttatatgggaataaaagtgaag
gatatgttaaaccagagcaaaaatttggaaaagatggaaattgatgatccaaaatctagt
aatattcaagaaatgaagattgagtaccaatctaacaatgaaaatgaacatggaaattca
attacagaagatgtaaaaatggaaattaaggattcccaaaagcttgaaaagattaaagaa
gaagttgaaaatacagacgaatccaatgatgagcccttccaaccaagaactctcagagat
tatcagatttatggcttaaattggatgatttctaggttcaaaaagaatgtaaatattctt
ttggccgatgaaatgggacttggaaaaacagttcagaccatatctgtagttggacattgt
ctctatatggaaaagattgttgctcctttccttgttgttgtaccccaaagtaccagtgat
aattggctacgagaattcaaaaagtggttaccggatgcaaatgttgttttatatcatggg
aatgcatacgctagagagttaataagatcttatgaactttccacaattgaaatgaaggat
gaagttgatgaaaatggaaactataacgagaatttagagtcaaaagatgaagttcataat
tataatcagaaaggcatgcaaggccacgcgcgcgcgggaactggcggaaatggatttttt
aggcgttgtaggtcaagatcatccaaacaaacaaggaagagatatagatttgatgtggta
ataactaccccttcaatattgaacagtcaggttgattgtgactttcttcgacaaattgat
tggtatatgatgatagtggatgaggctcatcagttgaagaacagggacagtaagcgtttt
aaggagttgcatgaatttggaactatgtatagattattattaagtgggactccattacac
aataatttggaggagctttggagtcttttacattttttgaatccattaaggttccagaat
tatcaggaatttagactaagataccctgatatagagaatccaaatgtaattggaccagat
aaacaaagacaattggaagatctccagagtgaactacaagagtacgttttaaggagagta
aagaaggatgttgaaaagagtttgccaaataaagtggagaggattttaagagtagagctc
tcacctcaacaaacagatatgtataaatcaattctgactcgtaactatgatgaactaagt
aagagtacaggaggtacaaaaacttccctacagaatatatgtatggagcttaaaaaggtt
tgcaaccacccttttttgattcatagaccagagttggatccttctcaaggtatcactgtt
gcgagtattcagcatcaactagtttatggatgtggtaaattatgcctacttgataaatta
ctttcaaggctaagagagaaaggaagtagggtattgattttctctcagatggtaagaatg
ttgaacatcatatctgaatttctagttttaaggggatttaggcatcaacgtttagacggt
acaatgggaaaagagcttagaaagaaggcaatggatcactttaactctccaaatagcgat
gatttctgctttttgctttccacaaaagctggaggacttggaatcaatttaactactgct
gacactgtaattatatatgattccgactggaatccacagaacgatttacaagcagaagca
agagctcatcgtataggccaaaaaaagcaagttcaaatttataggctagttacaaaagac
tcaattgaggagaacattcttgagagggcaaagactaagatggttcttgacactttagtc
gttcaaggacttaacaatattagtacaagcagttctcaaactcaagctagttcctctgct
gccgcatctgttttagctatggcctcccaagctctttaccctaatggaaagaagcccggg
tctggtggagcatctttcagccgtgatgaacttgccaaaattttaaaatttggtgcccag
aaactatggagtaagggcacaaacaatgttcccgctcaaagccagtcaggctctgactcc
acatgtggtcgatgtactgatgggcagtgtggggaagcatgcatgcaccgtgcagttaat
gtggatggcactcagggcgtagagaataaattaaaagaagatgagaattcagcggattta
ttggaagatgataagaggtttgcatctcaaatagatttagaccaagttttggctgatgct
gaagagcatgtgcatgacactcaaggtcttgctgatgggcttttgcgttcgtttgcaaat
attgcagattttaggtatgaggcgccaccattgataattgattccaatactggagctttg
gttccactaaatgagaagaagaaagaagataatgaggtagatttcgacagtaaggaattt
tgggaaaagacaataccagaggaggagagacttaagttgatagaacaaaaccagcagaat
acgataattacaggtcctcgtaagagtgctatgagagatggttctttaaaatatagggat
gatggatatacatatgttggcggtgataattcgggatctgaggatggaaggacaggaaga
ataggtgatcaggggcttgaggctgatgagaattttggaacaaagggcaaaaaacaatca
aagaagaagactaaggaaaagagtgttaagaaatcaagcggaagtgggagttcaggaaag
agcagggcttctagctcaagtggaggtagtaaaaagacggaggtgggttcgtctgaacaa
attgaagatgttgaaatggatttgggttctcaaaaagacttggataaaactccagaaagt
ttgggagaaatagtacctaatagagaggagtacccacttcctgaacattcattgcaaagt
agggaagactttgaagcattgatgttagaaataaccagttttccgcataaatataatcaa
gatgacgagcttttcccaagtgaaattaatataatctatagagatatttcaaatggtgtg
aaatgtgttaaaaatggaaagagagcaaggagagatcctcgagtactacatccaaagcgt
agatttaagttatttaggtcgattttgaaatttggtgacccatatagaagattggatgat
attattatagattctagattaaaaggtaaagtggagaaaggtactatattaaatgagtct
cagatcattgttgctttgtgttatgaaaaagctcaaaaggaactgtcatctgaaaatgtt
atggctgcatcaaaggaggaggttgagattaaggatgaagatgatgttcagaataataaa
tcaaataatgaggcaacgagtattttagagggtcaatcaactacagatagtacaataatg
ggaggaggcgtgcctttagaagttggctcaatggaggattttgctgaagaaaatgacatt
gaaaataataatcaagtttctaaaactgctttaaagaagaatttacttttgattggtagt
cacagagcaaatgctttagagcttgttgaaagaattaagatgttatcttctcttgacaag
cttatgagagaatgcaatcctggtgtagaaaagccttggaagcttccaactggtccttta
gctaggccagatagagaatcagttaaaagggatgaggataatgaaaatgaagatgatgtt
gatgatgaggatgaagacttggatgaggaggaggaaaaagaaaagtcgtttgaactttcc
aatgaaaataacttggaagaaaaaaagatcgagccaacaaatactgagaatgagaatgaa
aagcaatcaacacctaatggaaatgaatttgatggtaactatttgaagtttgaacttcct
ccagtattggttaaatcactcaggaccccttcctgggggattccttggacacttcaaaca
gatatagacatacttaaaggtatttatatttatggattttcaaactggacaatgatgtca
atggatgaaaatctgtctttatcttgtattaaaagagtcaaatttgataaattaaagcaa
agaactttgagagtgatgaagcatttacattctgtaatggttattggcaagactgctcgt
aagaagagaaagtttattccttcttctgatcaagaatataatgattttaataagaatgaa
aattctagctctaagcgtggaaagaaggttgcaaaaaagtgtgaagatcagaacaagaat
ggaactgatttatctggacaccttgttaatgataatagtaatggtgatcataataaaggt
tctataaaaagttcaaaaccattggttgtcgggggtaagaaaggactaccggaatttgtg
cttgaatgttctaatatggatgagaaagagttaagaagacaagcaaggacttgttttaat
aatagtaatgtgaagccccaacttttagagatcaaaaagcttttccatcctagcaacaac
atgacagactccgatgtcgttgcaagcctaaaagtcctgcttcctgttgttggggatgaa
atcaatgagatccttaaacttgcaacaaatgagatatccagaaataaggtccacaattgt
ctttggtcttatgttgcaaaatgcactgtatttcaaccccatgatattgaaaagatttat
cttagctggaaaggcattaatcctccagagaataatactgagactgtcacaaaagttaat
cctgatcctgttattgagcctgagcctgagcctgagcctgagcctaaacctaaacctgag
aatgagcctaaacctgagaatgagcttaaacctgagaatgagcctaaacttgagcatgag
cttaaacctgagaatgagcctaaacttgagcatgagcccaaacctgagaatgggccggga
attgaatcaaaatctgaacccgagcctagttccagtgccccctattaa
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