Cryptosporidium parvum: cgd2_1740
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Entry
cgd2_1740 CDS
T00168
Name
(RefSeq) RSC8 ortholog with a swirm domain, ZZ finger and Myb
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
cgd2_1740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpv03021
]
cgd2_1740
03036 Chromosome and associated proteins [BR:
cpv03036
]
cgd2_1740
Transcription machinery [BR:
cpv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
cgd2_1740
Chromosome and associated proteins [BR:
cpv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
cgd2_1740
PBAF complex
cgd2_1740
GBAF(ncBAF) complex
cgd2_1740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Troponin
Motif
Other DBs
NCBI-GeneID:
3373743
NCBI-ProteinID:
XP_626393
ApiDB_CryptoDB:
cgd2_1740
UniProt:
Q5CTS6
LinkDB
All DBs
Position
2:360387..362795
Genome browser
AA seq
802 aa
AA seq
DB search
MGGSDFPIGPKLRIRLKAENSETEIGLKHKKRKKYVSFNNGGIEAASEDSKVSLLIECNP
PSLRRVEFAEVLNIKLNQNIDNKEDTVDLMSDESVENEDTLDYLDNLEMEAKRIIEKNGL
KNKFDGHISKQTVENKDFKNNTLNLSDNDLPIVGNVECDEEIKTSNIIQETRNQITTNNR
VSSPIYSNLSQINNQSSLPPQPIQIAPNVVQQPLKTFANSLLLSKEKFSTRSFTPLDPNL
NSRLLLKVQLPESINQLYSLEGITHEDIKQNPETDETDETDKKIPVVIPTCSEWFDMDSV
HPIELEMLSPIFNNEMIDLRIDEKQDYKAEMSGNGNSNFLEEKVSSLNDEKINEYKLIRN
KIIEIYRETPRQYLTVTECRRRIIYTGDVSFLLKLHAYLEFWGLINFQADIKTLPPKLRK
LRDYRLNDIDIKRSNNKSTLNISRINDEAIDNPFINSMLVNCVSCGKSCIYSYYILRAGV
VCGVSVAVLDRCVWCIRCYSEGRYPPILNSGHFIKVDAPVVSSLTNPEEIPRMGALGIAS
WTKEEVQKLIEGIEYYGDDWDAISYHIGNVKTPQECVAYFIQLPIEEPFMRNINPSKNTK
PSFPFMDVSNPLMTQIALIASTINPVVAASAAKSALDRILEIEGYKEISKDASLMPDKDA
HLGDEAAGSCNANAHFDSKDGQYLPQYIPKVSSAKWPSSALLGEEGIQQVCSKALENAAL
RAKELAEWERNEVKNIMPYLIDNTINRLELKLRQFRHLQSMIDEERNLLEVRLEKIKKED
NEIKSKLSNAKGQVISKQTLRL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggcggatcagatttccctattgggccaaaacttcgtattagactgaaggcagaaaat
tctgaaacagaaattggtcttaaacacaaaaaaagaaaaaaatatgtttcatttaataac
gggggcattgaagctgcatcggaagattccaaagtatctcttttaattgagtgtaatccg
ccttctttacgcagagtagaattcgcagaagttttgaacattaaattgaatcagaacatt
gataataaagaagatacagttgatctaatgtcagacgaatcggttgaaaatgaagataca
ttggattatcttgataaccttgagatggaggcaaaacgaataattgagaaaaacggtttg
aaaaacaaatttgatggccatatctcaaaacaaaccgtagaaaataaagactttaaaaat
aataccttaaacttatctgataacgatttgcctattgttggcaatgttgaatgcgatgaa
gaaatcaaaactagcaatatcattcaagaaactagaaaccaaataactacaaataaccga
gtttcttcccctatatatagtaatttatcacaaataaacaaccaaagtagtcttcctcca
cagcctatccagattgccccgaatgttgtccagcaaccactgaaaacatttgctaattct
cttttactttcaaaagaaaaattttccacaaggtcatttactccattggatccaaacttg
aactccaggctcctattaaaagttcaacttccagaatccataaatcaactatattctttg
gaaggtattacgcacgaagacataaagcaaaaccctgaaaccgatgaaaccgatgaaact
gacaaaaaaataccagtagtgattccaacttgttctgagtggtttgatatggattctgta
catcctattgaacttgagatgctttctccaatatttaacaatgagatgattgatttgagg
atcgatgaaaaacaggattacaaagcagaaatgagtggtaatggtaatagtaacttttta
gaagaaaaagtgtcttcactaaatgatgaaaaaattaatgaatataaactgattcggaat
aaaattattgaaatatatagggaaactcctagacaatacctcactgttacagaatgtagg
agacgtattatatatacaggagatgtctcctttttacttaaattgcatgcttatctcgaa
ttttggggtttgataaatttccaagcagacattaagacgcttcccccaaaattaagaaaa
cttcgtgactatagacttaatgatatagatatcaaacgttctaacaataaaagcacgcta
aacatttctcgtataaatgatgaagcaatagataacccattcataaactcaatgttagtg
aattgcgtttcatgtggaaagtcgtgtatatattcatattatattcttagagctggtgtt
gtttgtggagtttcagtggcagttttagatcgctgtgtttggtgtattaggtgctattca
gaagggagatatccacctattttaaactctgggcactttattaaagtggatgctcctgtt
gtatcatcactgaccaatcctgaagaaattcccaggatgggagccttaggtatagcctcc
tggactaaagaggaagtgcaaaagcttattgaagggattgaatattacggtgatgattgg
gatgccatatcttaccatattgggaatgttaagacgcctcaagagtgtgttgcgtacttc
attcaactgccaatagaggaacccttcatgagaaacattaacccatcaaaaaacacgaag
ccctcatttccatttatggatgtgagcaatcctctaatgacacaaattgcattaatagcg
tcaacaataaaccccgtggtcgctgcatctgccgctaaatctgcgttagatagaatatta
gaaattgagggttataaagaaatttctaaagatgcttcactcatgcccgataaagatgct
catttgggagacgaagctgcgggaagttgtaatgctaacgcccattttgattctaaggat
ggccaatatttaccgcaatacataccaaaagtttcttcagcgaagtggccgagctcagca
ctactgggagaagagggaattcaacaagtttgttcaaaggcactagaaaacgctgctctt
agagcaaaagaacttgctgaatgggagagaaatgaggttaaaaatataatgccctacttg
attgacaacacgatcaatcgattagaactaaaactgagacagtttaggcatttgcaatct
atgatagatgaagaaagaaatttgttggaagtaagacttgaaaagataaagaaagaggac
aatgaaattaaatctaaacttagtaatgctaagggccaagttatttcgaaacaaacttta
agactataa
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