Cryptosporidium parvum: cgd2_4280
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Entry
cgd2_4280 CDS
T00168
Name
(RefSeq) holiday junction resolvase, S1x1p, URI domain nuclease
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
cgd2_4280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpv03400
]
cgd2_4280
DNA repair and recombination proteins [BR:
cpv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
cgd2_4280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
3373476
NCBI-ProteinID:
XP_626607
ApiDB_CryptoDB:
cgd2_4280
UniProt:
Q5CT62
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All DBs
Position
2:960475..961707
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AA seq
410 aa
AA seq
DB search
MKSNIQLHYCYFLLSEAKKKASYIGYSVNPCRRLRQHNGEIKKGAKKTKSGVPWNLGICV
GGFPDRVAALRFEWAWQHPNICKVTRDNIESWKIVKTKKTSENKRILNKRQWSIQQRVSI
LLCMTTLEPWKNMNLTVFVFKDELENTIKEVIEGIKKIKISPNFTSPNILNKDYLLMFLY
FGEDSFYEKGIKFLRCDYETFKEFQKPSFDCDSDSNIEDNSNVFNPEEIISHEDSFSIKC
FLCQKDIGIGRNYLEFPCCTEIKVHLSCIQLWGESNNHLETVIDELFPLKEFVAPLIPLN
ISCPCCFKDFEWEEAKKNYIKTKNVPTESLELGEDFPVLSNGEKENYSQEENSQNKVIED
GFLEMDIDNHRNRLSYAHETKQKRDILFSDDEFSEISQKCEFIDLTVDSD
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaatatccaacttcattattgctattttcttctctccgaagctaaaaagaaa
gcaagttatattggatattctgtgaacccatgcagaagactcagacagcataatggagaa
ataaaaaaaggagcaaaaaaaacaaaaagtggagttccatggaatcttggaatttgcgta
ggaggattcccggatagagttgcagcccttagattcgagtgggcgtggcagcatccaaat
atttgtaaagttactagagacaatattgagtcttggaaaattgtaaaaacaaagaaaact
tcagaaaataaacgaatattaaataagaggcaatggagtattcaacaacgagttagtatt
ttactttgtatgacaactttagagccatggaagaacatgaatcttacagtatttgttttc
aaggacgagcttgaaaatacaattaaggaagttatagaaggtataaagaagataaaaatt
tccccaaactttacaagtcctaatattttaaataaagattaccttttaatgtttttatat
tttggagaagactccttttacgaaaaaggaattaaatttcttagatgcgattacgaaact
tttaaggaattccaaaagccatcatttgattgtgattctgattctaatattgaagataac
tccaatgtgtttaacccggaagaaataatttctcatgaagattcattttcgataaaatgt
ttcctatgtcaaaaggacattggtattggaagaaattatttggaatttccttgctgtacg
gaaataaaagttcatctctcatgtatccagctttggggagagtcgaacaaccacttagaa
acggttattgatgagttattcccactaaaagagtttgttgctcctttaattccccttaat
atttcctgtccatgctgctttaaagactttgagtgggaggaagcgaagaaaaactacata
aagactaaaaacgttcctactgaaagtcttgaactaggagaagattttcccgtattaagt
aatggcgagaaagaaaactatagtcaagaagaaaactctcaaaataaagtgattgaagat
ggttttttagagatggatattgacaatcacagaaacagactctcttatgcacatgaaacc
aaacaaaagagggatattcttttctcggatgatgaattttcagaaatttcacaaaagtgt
gagtttattgatctaacagttgactcggattaa
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