Cryptosporidium parvum: cgd3_350
Help
Entry
cgd3_350 CDS
T00168
Name
(RefSeq) Pop2p-like 3'5' exonuclease, CCR4-NOT transcription complex
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cgd3_350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd3_350
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
cgd3_350
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
cgd3_350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
3374000
NCBI-ProteinID:
XP_626620
ApiDB_CryptoDB:
cgd3_350
UniProt:
Q5CV44
LinkDB
All DBs
Position
3:complement(<100292..>101125)
Genome browser
AA seq
277 aa
AA seq
DB search
MTNYANNNATVASKKGVIYEVWQNNINEAFQMISEIMDDFPYVAIDTEFPGVVVRPTNNY
YEYYYQTVRFNVDLLKVIQIGLSFRNKYGQAPTNICSTFQFNFKFDMECDIYSQESIQFL
RHSGIEFDKHLNSGIDFLCFGEYMYGSGLVLNPKVKWISFHGCYDFAYLVKILSSQPLPE
TETNFIELVKALFPTLYDLKFILKQLSSLSHLSSLQKLSEHLKIQRIGIAHQAGSDALVT
CCTFFKLFKLHLNSQVDDNLFNGQIYGFGLPPPTIVK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattatgctaataacaatgcgacagtggcttccaaaaagggagttatatatgaa
gtttggcagaataatattaacgaggcattccagatgatatcagaaatcatggatgacttt
ccatatgtcgctatagatacagagttcccaggtgtagtggtacgtcctacaaataattat
tatgagtattattaccaaacagtccgatttaatgtggatttacttaaagtaattcagatt
ggtttaagcttccgaaataaatatggccaagcacctacgaatatttgttcaacatttcaa
tttaattttaagtttgatatggaatgtgatatctattctcaggaatcaattcaatttctt
cgtcactctggtattgaatttgataaacaccttaatagcggaattgattttctatgtttt
ggcgaatatatgtatggaagcggacttgttcttaatcctaaagttaaatggattagcttc
catggatgctatgattttgcttaccttgtaaagattctaagttcacaaccactcccagaa
actgaaacaaactttatagaacttgttaaagcactttttccaacgctttatgatctaaag
tttattttgaaacaactttccagccttagtcacctttcctcactacaaaaactttctgaa
catcttaaaattcaaaggattggaattgcacatcaggctggttccgacgcacttgttaca
tgctgcacattcttcaagttatttaaactccatctcaactcccaagttgatgataacctc
tttaatggacagatatatggttttggcttaccacctccaactattgtcaaataa
DBGET
integrated database retrieval system
