Cryptosporidium parvum: cgd4_120
Help
Entry
cgd4_120 CDS
T00168
Name
(RefSeq) WD repeat protein
KO
K10752
histone-binding protein RBBP4
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03082
ATP-dependent chromatin remodeling
cpv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
cgd4_120
03083 Polycomb repressive complex
cgd4_120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpv03036
]
cgd4_120
Chromosome and associated proteins [BR:
cpv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
cgd4_120
Histone modification proteins
HAT complexes
HATB complex
cgd4_120
HDAC complexes
Sin3A-HDAC complex
cgd4_120
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
cgd4_120
PRC2.2
cgd4_120
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
cgd4_120
Heterochromatin formation proteins
Other heterochromatin formation proteins
cgd4_120
Chromatin remodeling factors
NuRD complex
cgd4_120
NuRF complex
cgd4_120
NuRF complex (fruit fly)
cgd4_120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
Beta-prop_RIG_2nd
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
3372666
NCBI-ProteinID:
XP_625621
ApiDB_CryptoDB:
cgd4_120
UniProt:
Q5CQM7
LinkDB
All DBs
Position
4:27620..29347
Genome browser
AA seq
575 aa
AA seq
DB search
YMDKLNNNPKIQEHWLWKKNVPFIYDYLFITPLRWPTLTFSIPPIRFNSEDMKAEEANSD
ISNDSEISLYGQLLIYGAYSSSVPSNIEGRAIDSNSHEKYITISMLDTPNFDVDLLMCDD
LPDGNSDKKLEKPNYLSPDINSIFKIMVNDDPIKICSRLDESKNRILIASKMLRGEIWFH
NIGIEEICDETFKVRARAINSKEESEIVSVYSSDYGNDTILNHKYNSGKSGYGMEWGTTN
SNWLLTGNEDSSLYIFDVNICEAVFKDQSYNISCGINDLCWINPTLTPNIFSTVNHQGCL
SIYDYRCSLKNSKSNVNSPINKWSISDSPCVSISAHPTVSNLISIGGYDGTIYIVDLRYF
SNNKQINGFHSHNKGIVNKFKYNTEPVHRLEWHSGGNGLLLSSSLDGKACIWDITRCNNL
PIWDQMDPNITNNFSSTSNSSPNSFRKNLESTNKSLDNPVDPEIDIKRSLKLLINNNSSS
WTKNEKSDGPNELIGVHSGHTGQITDSHWMFSPNNDSWTVVSTDTLNGLHVWSFNEAIFT
SENDLVELSYAKQTKFDQSIIYSTKDSIQNLVNSL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
tatatggacaagttgaataataatccaaaaatacaagagcattggctttggaagaaaaat
gtaccttttatttatgactacctatttattacgcccctcaggtggccaacattgacattt
agcatacctccaataagatttaatagcgaagacatgaaagctgaagaggcgaattctgat
attagcaatgactctgaaataagcttatatggtcaactattgatctacggagcgtattca
tcttcagttccatctaatattgaaggaagagctattgattcaaattcacatgaaaagtat
ataacaatctctatgttagatactccgaattttgatgttgatcttctaatgtgcgatgat
ttaccagatggtaattccgacaagaaattagaaaaacctaattacttatctcctgatata
aattctatatttaaaataatggtaaatgatgatcctataaaaatttgctcacgattagat
gaatcaaaaaataggattttaattgcttcaaaaatgctaagaggtgaaatatggtttcat
aatattggaattgaagaaatttgtgatgagacgtttaaagttagagcaagagcaattaat
tctaaagaagaatctgaaattgtttctgtatatagctcagattatggaaacgacacaata
ttaaaccataaatataactcaggcaagtcaggatatggaatggaatggggaacaacaaat
tccaattggttattaacaggaaatgaggattcttcactctacattttcgatgtaaatata
tgcgaagcagtatttaaggatcagtcatataatattagttgcggaattaatgatctatgc
tggattaatccaaccttaactccgaatatattttcaacagtaaatcatcagggctgctta
tcaatatatgattatagatgtagcttaaagaactcaaaatcaaatgtaaatagtcctata
aacaaatggagtatttcagattctccttgtgtttcgatttcggctcatccaacagtttca
aacctaataagtataggggggtacgatggaaccatatatatagttgacttgagatatttt
tcaaataataaacaaattaatgggtttcattctcataacaaaggcatagttaacaagttt
aaatataacactgaacctgtacacagactcgaatggcattcaggaggtaacgggcttttg
ctttcctcgagtttggacggaaaagcttgtatttgggacattactagatgcaataattta
cctatttgggatcaaatggatccaaatattactaataatttctcgagcacctcaaactca
tctccaaatagttttagaaaaaatttagagagcactaataaatctcttgataatccagta
gatccagagattgatataaaacgatcactaaagctattgataaataacaattcttcaagc
tggacaaaaaatgaaaaatcagatggccctaatgagctaataggggtacattctggacat
actggacaaattactgattctcattggatgttcagtcctaataatgactcttggactgta
gttagtaccgacactttaaatggacttcatgtttggtcctttaacgaagctatatttact
tcagaaaatgatctagtggaactatcttatgcaaaacagacgaagtttgatcaatccata
atatatagtacaaaagattctatacaaaatttagtcaacagcctataa
DBGET
integrated database retrieval system
