KEGG   Cryptosporidium parvum: cgd5_1130
Entry
cgd5_1130         CDS       T00168                                 
Name
(RefSeq) WD-40 repeat protein family / small nuclear ribonucleoprotein Prp4p-related
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    cgd5_1130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpv03041]
    cgd5_1130
Spliceosome [BR:cpv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    cgd5_1130
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st PRP4 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_IFT140_1st MIOS_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_WDR41 ANAPC4_WD40 WD40_RFWD3 WD_LRWD1 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 3373365
NCBI-ProteinID: XP_001388261
ApiDB_CryptoDB: cgd5_1130
UniProt: A3FQH7
LinkDB
Position
5:complement(261154..262473)
AA seq 439 aa
MNYIFINSAVSTNDEIVKLQLRELGEPICYFGEDQYRRRERLSNLIERQKNSTEVIKDSV
KPLAKETFFSEGTDELMSFRKKILALSIKKSYYRLKYTREFSEKILTKEKDDFLTRFTLN
IRQNICEMCDTRYILGCSISPLEDKIATYGLSGDLKVWDSKKLIQDFFLKSHKHSITDVN
WIVTDEGNSKLFSCDLNANIFLWNNSQVENKYIGHEDQVNKIVIHPFSKHLFSASSDETW
RIWDIETLNQVQVQEGHSRPIFGLDVHPDGALVVSGDSGGAFRIWDIRTGRSILSQLAHS
KKIITSQFSPNCDATFITSSQDNYIKIWDLRRFDKPLLSSLLGHSKQISKVQYEPKKGRY
IASASLDESIKIWSTSKLKNESTIDFNSDFSRITYSCIKRVDTNSHKITGMDISSNGQRI
ITVGLDRTIRVWSSESENS
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaattacatatttatcaactcggctgtttctacaaatgatgaaattgtaaaacttcaa
cttcgcgaacttggagaaccgatatgctactttggagaagatcagtatagaagaagagaa
aggctatctaatttaattgaaaggcaaaaaaactcgactgaagtaattaaggattctgtc
aagcccttggcaaaagagacatttttttcagaaggaacagatgaattgatgtcttttagg
aagaaaatcctcgcactatcgattaagaaatcatattacagattaaaatatactagagaa
ttttctgaaaaaatcttaacaaaagaaaaggatgattttttgacccgtttcacgctgaat
atcagacaaaacatttgtgaaatgtgtgatactagatatatattgggatgcagcatttct
ccgcttgaagacaaaattgccacatatggcttgagtggtgacttaaaagtttgggattca
aaaaaattaattcaggactttttcctaaagtctcataagcatagcattacagatgtaaac
tggattgttacagacgagggaaattcaaaactattttcctgcgatttaaatgcaaacata
tttttatggaataacagtcaagtggaaaataaatacatcggacatgaagatcaggtaaat
aaaatcgttatacatccattttcaaaacatttattttctgctagcagtgacgaaacatgg
agaatctgggacattgaaactttaaatcaagttcaagttcaggaaggtcattctagacca
atcttcgggttagatgtgcatccagatggagctctcgttgttagtggagattctggaggg
gcattcaggatttgggatatccgaacgggaaggtcaatattatcccagctggctcactca
aaaaaaatcattacctctcagttttctcccaactgtgacgctacatttattacatcctct
caagataattatattaagatttgggatttaagaagatttgacaaacctttgttatctagc
cttttggggcattcgaaacagatttcaaaagttcagtacgaaccaaaaaaagggagatac
attgcctctgcgtctttagacgaaagcatcaaaatttggtcgacttcaaagcttaagaat
gagtctacaattgactttaattcagactttagccgtataacttattcatgcataaagcgt
gtagatactaattcacataaaattacaggtatggatatttcttcaaatggacaaagaatt
atcacagttgggttagaccgcaccattagagtatggtcttcagaaagtgaaaattcgtaa

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