Cryptosporidium parvum: cgd5_2350
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Entry
cgd5_2350 CDS
T00168
Name
(RefSeq) SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with a UBP finger at the N-terminus
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
cgd5_2350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpv03041
]
cgd5_2350
Spliceosome [BR:
cpv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
cgd5_2350
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
DUF4187
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
3373124
NCBI-ProteinID:
XP_626172
ApiDB_CryptoDB:
cgd5_2350
UniProt:
Q5CRL4
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Position
5:506344..507840
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AA seq
498 aa
AA seq
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MGDHSEKDGERCPYLSSIKRSVLDFDYEKICSVTLREEHIYCCLVCGINYQGKGKGSMAY
KHSLELKHHLFINLTNSSIICLPNDYEIYEHSLEDIKGYLQPRFNSEIISSSLYDVSRTF
DGIEFSPGFIGLSNFGNNDSLNSIILILSRITEFRDLCLSYQLYSKEIEKRIPDPLLFSI
IESIQKIYNPNNLKGKFSPYNLVKIIEKKSNGKFSFSKISNISTSSNSFIQSNVGTQNST
IIDPMALFSWITYNLKKKIDKYLRKFQIKFIPDIDKNTNKSNMNIFDVCIKGELYNKASK
YPNNKKSESSTDNLMKSKKCSELKSTASICFNCLSLTLPSIIETTMGISNSAQSNEDKTI
SQIPIYQLLDSKFFSSSSSSQLISKLPYYLFIHFSRFSKANLNLEKNKTLVSFPLIDLDL
SSYIHPDYISLNPCTKYNLIANISHKGTIQSGKFLTQLLHPTRNEWIEIEDINVKVVLPQ
EILLNETYIIVYKRSDLI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccactctgagaaggatggagagagatgcccgtacttatctagcattaaaaga
agtgtgttagactttgactatgagaaaatctgcagcgtgacattaagggaggaacatata
tactgttgtctagtatgtggaataaattaccaggggaaaggaaagggttctatggcatat
aagcactctctggaactaaaacaccatttatttattaatttaactaactcaagcataatt
tgtcttccaaacgattacgagatttatgaacattctcttgaagatattaaaggataccta
cagccaagatttaattctgagatcatctcctcatcgctatatgacgtgtcaagaactttt
gatgggattgagttttctccaggatttattggtttgagtaattttggtaataatgactct
ttaaattcaatcattttaatactatctcgaatcactgaatttagagacttatgtcttagt
taccagctttatagcaaggaaattgagaaaagaattccagatccactcttattcagtatc
attgagtcgattcaaaaaatctataatccaaataatcttaaagggaaattttctccatat
aaccttgtaaaaattatagagaagaaatctaatggaaaattttcattttcaaaaatatcc
aatatttcaacgtcttctaattcattcatacaatcaaatgttggtacccaaaactcaaca
attattgatccaatggcactattttcttggataacatataatttaaagaaaaagattgat
aaatatctcagaaaatttcaaattaaattcattccagatattgataagaatactaataaa
tccaatatgaatatttttgatgtatgcattaagggagaactatataacaaagccagtaaa
tatccaaataacaaaaaatctgaatctagtacagataatttaatgaaatctaaaaaatgt
tctgaattaaaatctactgcaagtatttgttttaactgcctatccctaactctaccttca
attattgaaactacaatgggtatatcaaatagtgctcaaagtaatgaagataagacaatt
tcccagataccaatatatcagctactagactccaagttcttctcttcctcttctagttcc
caattaatatcgaaactaccttattacttatttattcatttttccagattttcaaaggct
aatttaaatctggaaaaaaacaaaactttggtttctttcccacttatagacttagatctt
tcttcatatattcatccagattatatttcattgaacccatgcactaaatataacttaatt
gctaatatatctcataaaggtacaattcaaagtggaaaattcctaactcaactcttgcat
cctactagaaacgaatggattgaaattgaggatatcaatgtcaaggtcgttcttcctcag
gaaatacttcttaacgaaacttatataatcgtttataagagatctgacttaatttaa
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