Cryptosporidium parvum: cgd5_3710
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Entry
cgd5_3710 CDS
T00168
Name
(RefSeq) small nuclear ribonucleoprotein U6
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cgd5_3710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd5_3710
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
cgd5_3710
mRNA degradation factors
5'-3' decay
Lsm complex
cgd5_3710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
3372544
NCBI-ProteinID:
XP_625536
ApiDB_CryptoDB:
cgd5_3710
UniProt:
Q5CQ90
LinkDB
All DBs
Position
5:complement(861189..861671)
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AA seq
160 aa
AA seq
DB search
MRDLNYDRTHNEDSSPNQNDEINSNNSNNNNNNNNQTSLSSWMLCLEEDLDKEIYVVLRD
GRQFTGIFRSFDQYGSLCLERSFEVFSNNDCYNEIYQGCMIFRGDNLMLCGLIDQNIKSY
NAKKIPLADILKIKQEEKNLKSINSNTSPNVFGWIPDDSI
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgagagacttaaattacgatagaacacataatgaagattcaagtccgaatcaaaatgat
gagataaatagcaataatagtaataataataataataataataatcaaacttctctatca
tcatggatgctttgtttagaggaagatctagacaaggaaatatatgttgtattgagagat
ggaagacaatttactggtatttttagaagttttgatcaatatggaagtttatgtcttgaa
agatcttttgaagtattcagtaataatgattgttataatgaaatttaccagggatgtatg
atatttagaggagataatttaatgttatgtggtctaattgaccagaatattaagtcatat
aatgccaagaagatcccattggctgatatattaaaaattaagcaagaagagaagaatctc
aaatctatcaattctaacacttcacctaatgtatttgggtggattcctgacgacagtatt
taa
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