Cryptosporidium parvum: cgd5_4290
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Entry
cgd5_4290 CDS
T00168
Name
(RefSeq) Swi/SNf2 RAD26
KO
K10841
DNA excision repair protein ERCC-6
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
cgd5_4290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpv03036
]
cgd5_4290
03400 DNA repair and recombination proteins [BR:
cpv03400
]
cgd5_4290
Chromosome and associated proteins [BR:
cpv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
cgd5_4290
DNA repair and recombination proteins [BR:
cpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
cgd5_4290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
WHD_Rad26_CSB
Motif
Other DBs
NCBI-GeneID:
3372576
NCBI-ProteinID:
XP_625591
ApiDB_CryptoDB:
cgd5_4290
UniProt:
Q5CQ35
LinkDB
All DBs
Position
5:complement(<983447..>986992)
Genome browser
AA seq
1181 aa
AA seq
DB search
MDESIVYIKKEADQSPTNGNNSTELGNFEEEEGGYEKEQEKEDEGIQDDGIVSFYENQNI
LDTYFDNSEAQELRDLGVSLVDANEVSNNIFEQMKSHFNTSNKPSKRKRASKRLGSSFLD
KDTLSGLEEETSISKLTKTELGNGNISSNQGESIHTSANDLGNDSRPESRLESISESRPE
SELEPVSEHVIEMDTFVDECLEVKDDLDLERYKSRVLKSRNRINQINESLEGSNTNSDST
YHTNCERDSLKIIKISRESENSQLFIWDKIWNALYPHQKEGVLWMWGLYCNNHGGILADE
MGLGKSITVTSFIAALFITFKRNQEAFLDDEANFIKSQLKSELNPNSEIVSRSNFSSMNM
VPNIKIETEFIKKLPDESLSSLNTSSTVEYEESSFDTNNCKMVLLVLPATLISHWIEVFN
KWYYPIRIILFHGKGESERRTMFDQLREVEKVSTELLVITTYETLRRNLQTLRQISWFYV
ILDEGHKIRNPDSGITLAVKSLGTCNRLLLSGSPIQNDLKELWSLIDFVYPGKLGTLPVF
EQQFVLPIKQAELRNAAKVQTMRALNCTRILQELIKACILRRRKHELQDILKLPSQAEHV
LFCNLTPVQYDVYCNCLDLLQAKQLVKNKMYGISKYFALLNILREACNHPELLKLVRRQN
KNGEIDSDFDFYEDQEDENGLNTELSWNRTLRNRRSDDNSDENSLYLRNINVNGRDSGKY
QALMSILKLWRDKKEHRVLIFTQGVRTLKLLSALLEKDLGLIPNKDVLTLDGSTPLSTRF
SLVKRFNQNQSIFLFILTSRVGGVGLNITGANRVILYDPWWNPMTDVQAKERCWRIGQKK
EVIVYRLITRDTIEEKIFQRQLFKEFIAKQILKDPKSQSSLNWTNFNELVKKPRKPKNYV
SDPKLVSNYIRNIKNIWGGKTRQRKDGNTHSSYFDDFDMYDKGGYDDFDNRRSKNSGKKE
VINDELNLFGEITFDAKSEHNAIMSILGDNNDDNLVSNSIGSSNNSSCSANSHTERSTHL
YSGYLSDDLAEATNEIIKTSVELIKQSEIERSNYDYSVPTWTGKSGQAGAPSSFILRNLK
RQRVIQGGGGFNSLEGSEDGNRYNTGGWDEETIRRRLTEYFMKRERLGIRTSTDDLLSSF
GELIPDSNHGLFRKILKQICTLNKSNNVTSKENYWVLKKRG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatctatagtttatattaagaaagaggctgatcagagcccgacaaatggaaat
aattcaacagaattgggtaattttgaagaagaggaaggaggatatgagaaagaacaggaa
aaggaagatgaggggatccaagatgacggaattgtctcattctatgaaaaccaaaatatt
ttagatacttactttgataactcagaggctcaggaactcagagatcttggagtttctttg
gtagatgcgaacgaagtaagtaacaatatttttgaacaaatgaaatcccattttaataca
tcaaataagccatcaaagaggaaaagagcttccaaaaggcttggaagctctttcctagat
aaagatactttatctggacttgaagaagaaacttctatatccaaacttactaaaactgaa
ttaggtaacgggaatatttcaagcaatcaaggtgaatcaattcatacatctgcaaatgat
cttggaaacgactctaggcctgaatctagacttgaatctatctcagaatctagacctgaa
tctgaacttgaacctgtttctgaacatgttattgaaatggatacctttgtagatgaatgt
ctcgaagtaaaagatgacttagacttagaaagatacaaatctagagttttgaaaagcaga
aacagaattaaccaaattaatgaaagtcttgaaggtagtaataccaatagtgatagcact
tatcatacaaattgtgaaagagatagtttaaagatcattaagatttcaagagagtcagaa
aatagtcagctattcatttgggacaaaatctggaatgccttatatccacatcagaaagag
ggagtactttggatgtggggattatattgcaataaccatggaggaatacttgcagatgaa
atgggattaggaaagtctattactgtgacttcatttattgcagcattatttatcacattt
aaacgtaaccaagaagcttttctagatgatgaagcaaactttattaaatctcaattaaaa
tcagaattaaatccaaattcagaaatagtttctagatcaaatttttctagtatgaatatg
gtaccgaatattaaaattgagacagaatttattaaaaagttaccagatgaatctttatca
tccttaaatacatcaagtactgttgaatacgaagaatccagttttgatacaaataactgt
aaaatggtacttttggtacttcctgctacattaatttctcattggattgaagtatttaat
aaatggtactatccaataagaattattttgtttcatggaaaaggtgaaagtgaaagaaga
acaatgtttgatcaacttagagaggtggagaaagtaagtactgagcttttggttattaca
acttatgaaactttaagacgtaatttacaaactttgagacaaattagttggttttatgta
attttagatgaaggacataaaattagaaatcctgattctggaattactttagcagtaaaa
tcattaggtacttgtaataggcttttattatctggatcaccaatacaaaatgatttaaag
gagttatggagccttattgattttgtttatccaggaaaacttgggacattacctgttttt
gaacaacaatttgtacttcctattaaacaagcagaattgaggaatgctgcaaaagttcaa
actatgagagctttaaattgcactcgaattctacaagaacttattaaagcatgcatatta
agaaggagaaaacatgaactacaagatatattaaagttaccatctcaagcagaacatgta
ttgttttgtaatttaactcctgtacaatatgatgtttattgtaattgtttggatcttcta
caagctaaacaattagttaagaacaagatgtatgggatttcaaagtattttgctttatta
aatattttaagagaagcatgtaatcatccagaactattaaaattagttagaagacaaaac
aaaaatggagaaattgattcagattttgatttttatgaagatcaagaagacgaaaatggc
ttaaatactgaattaagttggaatagaactttaagaaatagaagatctgatgataattca
gatgagaatagtttatatttaagaaatattaatgttaatggaagagatagtggaaaatat
caggcattaatgtcaatattgaaactttggagagataagaaagaacacagggtacttatt
tttactcaaggagtaagaactttaaagcttctttctgctcttttagagaaagatcttggg
ttgataccaaataaagatgttttaactttagatggctcgactcctttaagtacaagattt
tcattagtaaaaagatttaatcaaaatcaatctattttcttatttattttaacatctaga
gttggaggagttggtttaaatattactggagcaaatagagtaattttatatgatccttgg
tggaaccctatgacagatgttcaagctaaagaaagatgttggagaataggacaaaagaaa
gaagtaatagtttatagactaatcactagagacacaatagaagagaagattttccaaaga
caactttttaaagagtttattgcaaaacaaatacttaaagatccaaaaagccaatcaagc
ttaaattggacaaattttaacgagttagttaagaaacccagaaaaccaaagaactacgtt
tctgatccaaagttagtttctaattacataagaaatattaaaaatatttggggaggaaaa
acaagacaaagaaaagacggaaatacacactctagctattttgatgactttgatatgtac
gataagggaggatatgatgattttgacaatcgtagatcaaaaaattcaggcaagaaagaa
gtaataaatgatgaactaaatctttttggagagataacttttgatgctaaatctgagcat
aacgctataatgagtattttaggtgacaataatgacgataacttggtttctaatagtatt
ggtagttcaaacaatagtagttgctcggcaaattctcatactgaaagaagcacacacttg
tacagtggttatttaagtgatgatctggcagaagccacaaatgaaattattaaaacttcg
gttgagttgataaaacaatcagaaattgaaagaagcaattatgattatagtgttcccaca
tggaccggtaaatccggtcaggcgggcgcgccaagttcctttattttgcgtaatttgaag
cgccaacgagttatacagggaggaggcgggttcaattccttggaaggtagtgaggatggt
aatagatataatacaggtggatgggacgaggagacgataagaagaaggttgacggagtat
tttatgaagagggagagattggggataaggacaagtacagatgatttattgagtagtttt
ggggagttaatacctgattcaaatcatggcttatttaggaagatcttaaaacagatttgc
acattaaataagtcaaataacgtgactagtaaggagaactattgggttttgaagaagagg
ggataa
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