Cryptosporidium parvum: cgd5_920
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Entry
cgd5_920 CDS
T00168
Name
(RefSeq) Pre-mRNA splicing factor Pro1/Prp6. HAT repeat protein
KO
K12855
pre-mRNA-processing factor 6
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
cgd5_920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpv03041
]
cgd5_920
Spliceosome [BR:
cpv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
cgd5_920
Complex C
U5 SnRNP specific factors
cgd5_920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_19
Suf
HAT_Syf1_CNRKL1_C
TPR_15
TPR_2
Coatomer_E
Ribosomal_S8
Motif
Other DBs
NCBI-GeneID:
3373133
NCBI-ProteinID:
XP_626044
ApiDB_CryptoDB:
cgd5_920
UniProt:
Q5CRZ2
LinkDB
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Position
5:complement(225419..228190)
Genome browser
AA seq
923 aa
AA seq
DB search
MNNSYTYPLGINSSDLQISKKHNIFGEPPPDYVPGKGRGAIGFASGVSRDDQTITIEADI
GDYSDTKFDKFSGFNEHLFNDIKYDDDDRQADSIYEMIEEKLSTRRKKQKEKKIREEILK
VREHRPTLQEQFSGLKKSLGDVKIEEWDQIPEPGDYYIKNKKPKLFLPVPDEIIQSSHKN
LFETLTQKNCSNSELNTELTTELNELGTAKGNILSLKLDKAMGSVSGQSVIDPSKYLSSL
NTAGIKLNGDLSDIKKARLLLKSVVNTNPKHSPGWIAAARFEEFVGRLSHAREIIAKGCE
MCPKNEDIWLEAIRLGKPEQIDKIIVKSIKFIPNSTKVWMVAANRETNKNKKLLIIKKAL
EFIPNSIKLWKEAISLVDNESEKALLSKAVKCVPQSEELWLRYARLSEYCDAQKILNEAR
KVLPTFPGIWVEAAKLEEQNGKVEKVELIVKRCISNLSAKRFVHSRDDWLNRAGECEKEG
YSNTCISIIKNTWNLGIDDDAINDQVFSYIDNFIKSNNIISARAMFESSADMFKSKEYFW
IKWANFEEKYGNFEKVDHVLQKSLKNCPDKQILWLKAAQNQSANGNAEIARLILSKGYSS
SLNDKEEIVLEAARLELSQGEIERAKIILERERTNSPSVQIWVESIKLENDQKNYDLCIL
YCSESVKEYPSSPNLWLLYGFIYRKAFPDRINEALKIYEEGLNFCSDSIELWFSTIELLM
LLQNWKKARTFLDLARSKNKNQPELWMQTIKLEKNAGNNEFIPQILSKALKECPKSGLLY
AESIFTEQKQKQKSKFLIALEQCGNDPYVLVAIAISFWKENDFHKSRKWFKSALEIDNKI
GDTWIHYIAFELLNGDFQSQRDALNDFINATPNKGFEWNNIRRTHFFWDQKSNEILIICL
ELIYGIKKSFIVSNEIKQLLGLI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcttatacatatcctcttggaataaattcttcagatctacagatttcaaaa
aaacataatatttttggcgagccaccgccagactatgttcctggaaaaggccgtggtgct
attgggtttgcaagcggagtcagtagagatgatcaaacaattacaattgaggctgatatt
ggtgattattctgataccaagtttgataaattttctgggtttaatgaacatctatttaat
gatattaaatacgatgatgatgatcggcaagcagattcgatatatgaaatgattgaagag
aaattgtctaccagaagaaaaaaacaaaaagaaaagaaaattagagaggagattcttaag
gtaagagaacataggccgactttacaagagcagttttcaggtcttaagaaatctttgggg
gacgtaaaaattgaagaatgggatcaaattcctgaaccaggagactattatattaagaac
aagaaaccaaaacttttcttgcctgtaccagatgaaattatacaatcttcacataagaac
ttgtttgaaactctaacccaaaaaaactgttctaattcagaattaaacactgaacttact
actgaattgaatgagcttggaacagctaagggtaatatcctttctttaaaattagataag
gcaatgggcagtgtttctggacaatctgttattgacccatcaaaatatctcagttcttta
aacacagctggtattaaattaaatggggatctatctgatattaaaaaagcaaggctatta
cttaaatcagtagtaaatacaaaccctaaacattctccaggttggatagctgcagccaga
ttcgaagagttcgtaggtagactttcccatgcaagagaaattattgcaaaaggttgtgaa
atgtgcccaaagaatgaagatatttggctggaggctattagattaggaaagccagaacaa
atagacaaaataattgtgaaatcaataaaatttatcccaaactcaactaaagtttggatg
gttgcagctaatagagagacaaataaaaataaaaagttactaataattaaaaaagctctt
gaatttattccaaattcaattaaactttggaaagaagcaatatcacttgttgataatgaa
tctgaaaaagctctactatcaaaggctgtaaagtgtgtacctcaatctgaggagctttgg
ctaagatatgcaagattaagcgaatactgcgatgcgcaaaagatactaaatgaagcaaga
aaagtattgcctacatttcctggtatttgggtagaagcagcaaagttagaagagcaaaat
ggaaaagttgagaaagtcgaattaattgttaaacgctgtatttcaaatttatccgctaaa
aggtttgtacactcaagagatgattggttaaatagggcaggggaatgcgaaaaagagggt
tattcaaatacatgtatttcaataataaaaaatacatggaatcttggaattgatgatgac
gcaattaatgatcaagttttttcctatatagataacttcataaaatcaaataatataata
tctgcacgtgctatgtttgaatcatctgcagatatgtttaagtcaaaagaatatttttgg
ataaaatgggctaattttgaagaaaagtatggtaactttgaaaaggtagatcatgtttta
caaaaatcacttaagaattgtccggacaaacaaatactttggttgaaagccgcacaaaat
caatcagcaaatgggaatgccgaaattgcacgattaattctgtcgaaaggatattcttcg
agcttaaacgataaagaagaaatagtattggaggcagcaagattagaactatctcagggt
gaaatagaacgtgccaagattattttagagagagaaagaactaactctccatcggtacaa
atttgggttgaatcaatcaagctagaaaatgaccaaaaaaactatgacttgtgtatactc
tactgctctgagtctgttaaagaatatccaagctctccaaatttatggcttttatatgga
tttatttatcgaaaagcctttcctgatcggatcaatgaagccttgaaaatatacgaagaa
ggattgaacttctgcagcgattcaatagaattgtggttttctactattgaattattaatg
cttttgcaaaattggaagaaagctagaacatttctagatttggcccgttcaaaaaacaaa
aatcaaccagaattgtggatgcaaacaattaagttggaaaaaaatgcaggaaataatgag
tttatcccacaaattttatctaaagcattaaaagaatgcccaaaatctggattgctatac
gcagaaagcattttcactgaacaaaagcaaaaacaaaaatccaaatttttaattgcttta
gaacagtgtggaaatgatccttatgtattggttgctattgcaatatcattttggaaagaa
aatgattttcataagtcaagaaaatggttcaaaagtgcactggaaattgataataagata
ggtgatacgtggatacattatattgcatttgagttgttaaatggggattttcaatctcaa
agagacgctttaaatgactttattaatgctactccaaataaagggtttgaatggaacaat
attaggagaactcattttttctgggatcagaaaagcaatgagatattaatcatttgtcta
gagttaatatatggcattaaaaaatcttttattgtttcaaatgaaatcaaacaactttta
ggattaatttaa
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