KEGG T00168: cgd6

Cryptosporidium parvum: cgd6_1730

Entry

cgd6_1730         CDS       T00168

Name

(RefSeq) cleavage and polyadenylation specificity factor 4-like; 3x Zn C3H1 domains

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

cpv Cryptosporidium parvum

Pathway

cpv03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:cpv00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    cgd6_1730
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpv03021]
    cgd6_1730
   03019 Messenger RNA biogenesis [BR:cpv03019]
    cgd6_1730
Transcription machinery [BR:cpv03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     cgd6_1730
Messenger RNA biogenesis [BR:cpv03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     cgd6_1730

SSDB

Motif

Pfam:

Torus zf_CCCH_4 zf-CCCH zf-CCCH_2 zf-CCCH_4

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

ApiDB_CryptoDB:

UniProt:

LinkDB

Position

6:<398173..>398709

AA seq 178 aa
MSARLSIEDVIERMEDEKLRLLQNQSVTRYDPNVRGRHSVVCRHWIRNMCMKGDFCDFLH
QYNYERMPPCFIYQKYGVCVDEALGNCPFKHKADDTPLCAQYFLGFCKYGPKCKRRHEPK
ARHEIPDFLPDSFLLSIIQDKNLIPKMDPETSSIIKVLDDICKESYAQAVCSEVSSNI

NT seq 537 nt +upstreamnt +downstreamnt
atgagtgcaaggttaagtattgaagatgtaattgagaggatggaggacgaaaaacttcgc
ttgctacaaaatcagtctgttacgagatatgaccctaatgttagaggccgacattctgtt
gtttgtaggcattggattagaaatatgtgtatgaagggggatttttgcgattttttgcac
caatataattatgagagaatgccaccatgctttatatatcaaaagtatggcgtatgcgtg
gatgaggcactagggaattgccccttcaaacacaaggcagatgacacaccactttgcgcg
caatatttccttgggttttgtaaatatgggcctaagtgtaaaaggcgtcatgagccaaaa
gcaagacacgaaataccagattttcttcccgactcattcctattatctataatacaggac
aaaaatttaatacctaaaatggatccagaaacatcttccatcatcaaagtattagatgac
atttgcaaagaaagctatgcacaagctgtgtgctcggaagtatcaagtaatatttaa

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