Cryptosporidium parvum: cgd6_3010
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Entry
cgd6_3010 CDS
T00168
Name
(RefSeq) poly(a)-binding protein fabm
KO
K13126
polyadenylate-binding protein
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03015
mRNA surveillance pathway
cpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
cgd6_3010
09123 Folding, sorting and degradation
03018 RNA degradation
cgd6_3010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd6_3010
03041 Spliceosome [BR:
cpv03041
]
cgd6_3010
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
cgd6_3010
mRNA cycle factors
Stress granule specific factors
cgd6_3010
Spliceosome [BR:
cpv03041
]
Complex C
Other components
Complex C specific factors
cgd6_3010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RBD_DEAH11
RRM_occluded
RRM_YTH1
PABC_AtC3H46
CDC45
Motif
Other DBs
NCBI-GeneID:
3375959
NCBI-ProteinID:
XP_001388334
ApiDB_CryptoDB:
cgd6_3010
UniProt:
A3FPV5
LinkDB
All DBs
Position
6:<692126..>694366
Genome browser
AA seq
746 aa
AA seq
DB search
MTSNNNVVPVSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNY
NSVADAERALDTLNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTF
SLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAE
RFSEKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRPFGFVNFENPDS
AKAAVAALHNALVTPVGVELDSTAETPVDNEAGADSETSSKQESGEASNKKQTASGEASK
DSSGTSNEESAQNEDGSADKNVSADVQPNRLYVSRAQKKNERQVVLKSQHEAVKESHQRY
QGVNLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAI
TEMHLKLVRGKPLYVGLHERKEQRALRLQQRIRGGAVPPVLRPGAIPPGPPGVHGAPMQF
GVPPQMYFIPGNPNVAATAMPHGRAMVTGGFPNQNAMNNPWRPNPTRMPYTAGGVPPQMT
GGPQMTAYNGNVIQQNGVSPNGAANATGSVQNGVTGNAVTGVQGAQNNRTGGNNQRIHNR
HVQGNGQGGRPGSHGHQVQQMQKQGFKFPQNVKGSEMQRVDMMQNRQMDSSNGALVQNPL
IPQPDVPLTAATLAAASPSMQKQLLGERLFPIIAQFQPELAGKITGMMLEMDNNELLELL
SSDIEIKNKVDEAMVVLERAQQQIST
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaataataacgtagtaccggttagtgcctccctttatgtgggtgatttggat
gcagatgtgactgagacaatgttatatgaaatatttaatagtgttgcagttgtatcatca
gtacgtatttgtagagacgctcttacaagaagaagcttgggttatgcttatgtcaattac
aatagtgtagcggatgctgagagagctctagatactcttaatttcacatgcatccgtggc
cgtccatgcagaattatgtggtgcttacgcgacccagcatccagaagaaacaacgatgga
aatgtatttgtaaagaatttggataagtcgattgataataagacattattcgatactttt
agtctatttggaaatattatgtcatgtaaaatcgctaccgatgttgagggtaagtctttg
ggatatggttttatccatttcgaacatgcagacagtgctaaagaagctatttctaggcta
aatggggctgtattgggagatcgcccaatttatgtcggaaagttccagaagaaggctgaa
cgcttttctgaaaaagataagacattcactaatgtctatgttaaacatatccctaagagt
tggactgaagatcttctatacaagatatttggagtatatggtaaaattagctcattggtc
ctgcaatccgactctaaaggtagaccttttggttttgtgaactttgaaaaccccgattcc
gctaaggctgcagttgctgccttacacaatgctttagttactccagtaggggttgagttg
gactctacagcagagactccagttgataacgaggctggagctgattctgagacatcatcc
aagcaagaatctggagaagcttctaataaaaaacaaactgcatctggcgaagcatcaaag
gattcttcaggaacatcaaacgaggaatctgcacagaatgaggatggatcagctgacaag
aatgtttcagctgatgtacaaccaaatagactatatgtttctagagcacaaaaaaagaat
gaacgtcaggtggtcttgaagtctcaacacgaagctgtaaaggagagccaccaaagatac
caaggtgtaaatctttatgtaaagaatttggcagattcaatcaatgaggaggacctccgt
tctatgtttgaaccatttggaacagtatcttccgtaagcattaagactgatgaatcaggt
gtctcaagaggatttgggtttgtttcattcctctcccctgatgaagctacaaaggctatt
actgagatgcaccttaagcttgtgcgcggaaagccactgtatgtaggccttcacgaacgt
aaagaacaaagagcactacgtcttcagcagcgtattagagggggtgcagtccctccagtt
ttaagacccggagcaattcccccaggccctccaggagtacatggagctcccatgcaattt
ggtgtaccaccacaaatgtactttattcctggaaatccaaatgtggcagcaactgctatg
ccacatggaagagcgatggttacaggaggtttccctaatcaaaatgcaatgaataatcca
tggaggccaaatccaacaagaatgccatacactgcaggaggtgtgcctcctcaaatgaca
ggcggtcctcaaatgacagcctataatggcaacgttatccaacaaaatggagtatctcca
aacggagctgctaatgctaccgggtctgtccaaaatggagtcaccggtaatgcagttaca
ggagttcaaggtgctcaaaataacagaactggaggaaataaccagagaattcataataga
catgttcaaggtaatgggcaaggaggaaggccgggctcccatggtcatcaagttcagcaa
atgcaaaagcaaggattcaaatttccacaaaacgttaagggatctgaaatgcagcgcgtg
gatatgatgcaaaatagacaaatggattcatcaaacggcgcacttgttcagaatccatta
atccctcaaccagatgttcctctaactgctgctaccttggcagctgcatcccctagcatg
cagaaacaattacttggagagagacttttcccaattattgcccaattccaaccagaattg
gcaggaaagatcaccgggatgatgcttgaaatggataacaatgaattattagaacttttg
agttctgatattgaaatcaaaaacaaggtagatgaggccatggtcgtacttgaacgtgct
cagcaacaaattagcacgtaa
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