Cryptosporidium parvum: cgd6_400
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Entry
cgd6_400 CDS
T00168
Name
(RefSeq) Pre-mRNA polyadenylation factor
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
cgd6_400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd6_400
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
cgd6_400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
3376102
NCBI-ProteinID:
XP_627423
ApiDB_CryptoDB:
cgd6_400
UniProt:
Q5CXN1
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All DBs
Position
6:complement(<93302..>94285)
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AA seq
327 aa
AA seq
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MSGSNLEDNISKNNNGTKNEDYDENDNEDDDEDITFLICGGNEEGGLKDFSKLNDKISST
GGDNEVDNSINPASDVLKKGMTDCKPGNTGASNGNSSNINNQKMNTGDQNLHALNVSNTI
YIDNEDTATEENPCKNLQMVWDNNPELRPWSRLLDVSPWFNYGFTEKTFKEYIIRQLGIR
WERIKKQNIETSDDLLNKSTITSGISNSNNVNANLNINNSNTGLPNPNIKMMNNLPPPPP
ITGFPSNMIYFPPPPPPHLNPPIPGHPNIYHQQHMFNNFPHHIPHHSHIPPPIPSHQIMH
HPGLPPNNMNPGANTAFNARSKKRPAE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggagtaatttggaagataatatttcaaagaataataatggaacaaagaatgaa
gattatgatgagaatgataatgaagatgatgatgaagatataacatttttaatttgcgga
ggaaatgaagaaggaggattaaaagatttttcaaaattgaatgataaaataagttcaaca
ggtggtgataatgaagtagacaattcaattaatccggcttcagatgttttgaagaaagga
atgacggattgcaaacctggaaatacaggagcaagtaatggtaactcttcgaatataaat
aatcaaaaaatgaatacaggagaccaaaatttgcatgccttaaatgtttctaatacaata
tatattgacaatgaagatacagctacagaagaaaatccatgtaaaaatcttcaaatggtt
tgggataataatccagagttaaggccttggagtagattactggatgtttcaccttggttt
aattatggctttacagaaaaaacatttaaagaatatattattagacaattaggtataaga
tgggaacgtattaaaaaacaaaacattgaaacaagtgatgatttactaaacaagagtaca
ataacatctggtatttctaactcaaataatgtgaatgcaaatttaaatattaataattca
aatactggtttaccaaatccaaatattaagatgatgaataatttaccgccaccaccacct
ataacagggttcccatcaaatatgatttatttcccacctccacccccaccacacttaaat
ccaccaattccaggtcatccaaatatttatcatcaacagcacatgttcaacaactttcct
catcatatccctcatcattcgcatattccacctccaataccttctcatcaaattatgcac
caccctggattaccgccaaacaatatgaatccgggcgccaacaccgcatttaatgcaagg
agcaaaaaaagacctgcagagtaa
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