Cryptosporidium parvum: cgd6_5250
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Entry
cgd6_5250 CDS
T00168
Name
(RefSeq) transcription elongation factor, SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
cpv
Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpv03021
]
cgd6_5250
03036 Chromosome and associated proteins [BR:
cpv03036
]
cgd6_5250
Transcription machinery [BR:
cpv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
cgd6_5250
Chromosome and associated proteins [BR:
cpv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
cgd6_5250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
HTH_44
DUF6596
Motif
Other DBs
NCBI-GeneID:
3375839
NCBI-ProteinID:
XP_627844
ApiDB_CryptoDB:
cgd6_5250
UniProt:
Q5CWG0
LinkDB
All DBs
Position
6:complement(1238615..1245313)
Genome browser
AA seq
2232 aa
AA seq
DB search
MEQESRSSHEGGSNTNEATDKVFQSLEESGSQDLDVFDANKANEKTFTEDKDELVGNTDK
NELEDTQDDSTKILSSANKLTENSRAQRPKKKKRRQQGSIIGGGSLQALLHATTSDNHSS
QSDSSEISDDSRSEKRSRKRKSSVSKSQKKNREKYKMYIHDEAEEDDEDGEEKAREGSQE
RPNRRKRDSRSSSEDEDEDDEEGYDELKDFIADEVEEDGIDDSLVYRGPHILSHSASQGE
GDLLASNGMPEAGNESSEDDDDDEILRGGLEEDDLALIEENTGIRLNKDSQKHRLKKVSE
ALDSPNKTLVGKDIGDLEDLLFNTGADQEEDSSYKPRDYDPVPGFDSENSEDADDWMVDD
MDEKGLRGDEFNIIQSVFGDYDTVMDILMNKVSKSKDVLEGGPMLDSENYNNTKFPKVSE
ELDSEKTIVGGDHEIDMVDDIDEELFGEGIEREEGEVENIQDKMKKTTLQTLHSISEPAQ
LQGQFLTDFDGEVKYADIPERLYLLYGSRWKSLKERKISKQELQQEALWISRKFLQTYPE
LFKEELLRRSHNLEFKTSFPYVSNGGVMQVVSNAVFLVLDWILNERLDVPYISLHKMHLI
QPPLNDFLLGKIVFLDSIYYKLKLSIESFQQKLLSIREKKSISDIFRISELYELPEDHII
QAFLTVSGLQETLQSSYYFDSSRDIDNIRSYFLYHIDTPRFKQIEETSIGESSNIIQSTQ
IGKDNMGYSNRKQRRNYMIELFEYIETNELFKVWSPHIVSPYVLSLYLKSFTSPQFHCST
PSGTIPGLPNTFSLLPPGGPVLENSKTALHKWLEKLVRQDNPMFSSSEKILDSLIVYESR
RLASFPAIRAKIFEYFLSNACITTVTTTKGEKTLSPNGVFWLARRLFRKPVNTLLPGTYL
PLNDDSGLDAQNSNSNTLFDGCLCSEVLELERRGLIELIVHPLCIDDPAPWRGSDGEARI
KERFLHEIGLLDSGIESNSIQKGSLPAPIMNRFDQEFRMYVNSDNIDNRIVRNILDELKY
GYVSISGSIWSKLIQIPILHRLIEKELFPSFRIEVINYLKMRSQEYIAELCSLNLQKRLR
VLPPKHPGKDETMDTQNGRSGENHKGEKTKKDDDYDSDEDDFDNDYSGNTIESDDENFIS
RRSRNSRWRGASEDNFNTIKEEYNTNWGLNVISCVVEKAQNGFKVCVVSLDIFGELRDFL
VMDHLLGNMSHRNSRHNDSRYNDKGDNSGSLESQRFEEDMENLIRFTKMYYPHYICVGIS
DRKSLELAGLWNNILKKVKRKDHKFTPGFLFVSMDVSRALVRRSGSDQKTSGSQKPKGLQ
SEYPMYVSLAVSVGRLVQNPLAEQLQLWEDSGNEIESELSANIFGLDNELGAISSSSSTG
AKDWFNPITCLKLHRLQDSVDPKMLQFHLLLAIRSVVANLGVQINRMKGHSHLQSPLKFV
SGLGPRKAKSLAFYLDSHPGPISTRSQLRQDDNHNETTNHRKSSSIDNNHYEYDFRQGEQ
HQDGCLTKNVYLNAQVFLRVDEESCNEREYNRNLNIFDISRLSDVEDKELVLTILGNIRD
QVSEESVSGIRQKSKEKDETVLWTWISKRSSKLETLDLEAYAKLMYENQDRPRLLPYLNR
MLRELKKPYDCSFVSREFRGIEKSRQLRESFEISKEDLFIGCEITCRITGVLNNVRGPSR
CPITLWFDQYNMKVVLEDFDTLWEELLDEFPKLQSVSFDNLFKLNTPLQAIVTNIDFSQH
CVFVNLSQSKICNILNYLIDGVWRQQQYRLDMIEKHRYDSNSGGSSQSQGGQTNNTDSSS
ISMHNIAIQEYQRNDFNLLQDDLSALIWTDIRHFAFILFKKNLNVLSTSSGLNLNSGLGK
NGIGSGDRLWDRESRGDNKYRGTILRTIHHPNFRSWTHEQIIEHMKSETVPLGEVIIKSS
TKYIDKLNMYVKVCENPFMFKVINIDEFDQRLPGELGRRLRIDDSDFNDIDQILIQYVHP
LKVHLSNVFSHPKYRSNMEYQNLVTELLVESSTSGNSIVWGITADKQIPCRFHLISVPPN
SRVGSSGARIHFEDGIYVNHKGFQLWRKSENTLRKLLNWWKTEGFFKRSKHLEDYKRYKE
YMVRQKQGKANSEDDFGSRKFGTSHHNSYHYNSGGGGGGGGSGGYQSQHSSNYSHSRHNH
AADNFGSQTGGSHSKSGGGASQYGSHSHSGGFRKSFHGYPPPQMEGGSAHHYPPAPEPYE
SSFQGNYRYSRR
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaatcaaggagctctcatgaaggagggtcaaacactaatgaagctactgac
aaggtttttcaaagcttagaagagtctggttctcaggatttagatgtctttgatgctaat
aaggccaatgaaaagacttttactgaggataaggatgaattagtcggtaatactgataag
aatgaattagaagatactcaagatgattccactaagattttgagttccgctaataaactc
acagaaaattctcgggctcaaagaccaaaaaagaagaagcgtcgtcaacagggatctata
ataggaggaggatctttacaagctctgttacatgctaccacatctgacaatcattcttct
caaagcgattcttctgaaatttctgatgactctaggtcagaaaagcgaagccgtaagagg
aagtcttctgtctctaaaagccaaaagaagaatcgcgaaaaatacaaaatgtatattcat
gacgaggccgaagaagatgatgaggatggggaagaaaaagctagagagggaagccaagaa
cgtcctaatcgtagaaaaagagactctcgctcatcatcagaagatgaagatgaggatgac
gaagagggttacgatgaattgaaggattttattgctgatgaggtcgaagaggatggtatt
gatgatagtttggtgtacagaggtccacatattctgtctcattcagccagccaaggtgaa
ggagatctacttgcttcaaatggcatgcctgaagcaggtaatgagagttcagaggatgac
gatgacgacgagattcttagaggaggcttagaagaggatgacttagctttaattgaggaa
aatactggaatacgtctcaacaaagattctcagaaacaccgtttaaagaaagtctctgaa
gctcttgattctcccaataagacacttgtcggtaaggatattggagatttggaagatctt
ctttttaatactggtgctgatcaagaggaggactcatcttataaacctagagattatgat
cctgttcctggatttgattcagagaattctgaagatgctgatgattggatggtcgatgat
atggatgaaaagggtcttagaggagacgagttcaacattattcaatcagtatttggtgac
tatgatacggttatggatatacttatgaacaaggtttcaaaaagtaaagatgtattagaa
ggtggtcctatgcttgattctgaaaattataacaacacaaagtttcccaaagtatcagaa
gagcttgacagtgaaaagactattgtaggtggagatcacgaaattgatatggtagatgat
attgatgaggagctctttggtgagggaattgaaagagaagaaggtgaagtggagaatata
caggataaaatgaagaaaactacccttcaaactttgcatagtatttctgaaccagctcaa
ttgcaaggacagtttcttactgactttgatggcgaagttaaatatgctgatatacctgag
agactatatctattatatggaagccgttggaagtcacttaaagaaaggaagattagtaag
caggagctacaacaagaggctttatggatttcaaggaaattccttcaaacttacccagaa
ctttttaaggaggagcttttaagaagatcccacaatctggaatttaaaacatctttccca
tatgtctcaaacggaggtgtaatgcaggtggtttctaacgctgtctttttagttttggac
tggattctaaatgaaagattggatgtcccatatatttccctacataaaatgcatctgata
cagcctcctcttaatgactttcttttgggaaagattgttttcttagattctatatattat
aaactcaaattatcaattgaaagcttccaacagaaacttttatctattcgagaaaagaaa
tctatttctgatatatttagaatctctgaattgtatgaacttcctgaagatcatataatc
caggcattccttactgtctcaggcttacaggaaacactccaatctagctattactttgat
tcatccagagatattgataatattagatcttatttcctttatcatatcgacactccaaga
tttaagcaaattgaagaaacttctattggagaatcatcaaatattatacaatctacacaa
attggaaaagataatatgggatattctaacagaaaacaaaggaggaactatatgattgag
ctatttgagtacattgaaacaaatgagctctttaaagtttggagtccacatattgtttct
ccttatgttttatctctatatttaaagagctttacatctccacaatttcattgttctaca
ccatctggaactattcctggccttccaaatacatttagtctacttcctccaggaggtcct
gttttagagaattctaagacagctcttcataaatggttagaaaaattggttagacaggat
aatccgatgttttcaagtagcgagaaaatcttggattcgttaattgtatatgaatctaga
cgccttgcaagctttccagcaattagagccaagatatttgagtacttcctttctaatgct
tgtattactacagttacaactacaaagggtgaaaagacattaagtcctaatggagttttt
tggcttgcaagaaggctatttagaaaacctgttaatactttattacctggaacatatctt
cctttgaatgatgattcaggtttggatgctcaaaactctaattctaacacattgtttgac
ggatgtttatgctctgaagttctcgaacttgagagacgtggattgattgagcttattgtc
catcctctttgtatagatgatcctgctccatggagaggatcagatggagaagctagaatc
aaagagcgtttcttacatgaaattggactcctagattctggaatagaatcaaattcgatt
caaaaaggatctttaccagctccaatcatgaatagatttgaccaggagttcagaatgtat
gttaatagtgataatattgataacagaattgtaagaaatatattggatgaattaaaatat
ggatatgttagtatttcaggctcaatttggagtaagcttatccaaattccaattctacat
agattaattgaaaaagaactttttccaagctttagaattgaggtaattaattacctcaaa
atgagatctcaggaatatattgctgagctttgttcacttaatcttcaaaaaagactccgg
gttcttcccccaaagcatcctggaaaagatgaaacaatggatacccaaaatggtagatct
ggagaaaatcataaaggagaaaaaactaagaaagacgatgattatgactcagatgaagat
gattttgataatgattattctggaaatactattgaaagtgatgatgaaaactttatttct
agaagatctagaaattccagatggagaggagcctctgaagacaattttaatacaatcaaa
gaagaatataatacaaattggggtcttaatgtaatatcttgtgtggttgagaaagctcag
aatggatttaaagtctgtgtagtttctttagatatttttggagagcttagagacttttta
gtaatggatcatttattaggtaatatgtctcatcgaaattctagacataatgatagtaga
tataatgataaaggagataattcaggatctttagaatctcaacgctttgaagaggatatg
gagaatctaattcgattcacaaaaatgtactatcctcactatatttgtgttgggatttca
gatagaaagagcttagagttagcaggtctttggaataatattctcaagaaagttaaaaga
aaggatcacaagtttactccaggatttctatttgtttctatggatgtctcaagagctcta
gtacgtagatcaggttctgatcaaaagacttctgggtcacaaaaaccaaaaggtcttcaa
tcagagtatccaatgtatgtcagtctagcagtttctgttggaagacttgttcaaaatccc
ttagctgaacaattacagctttgggaggactcaggaaatgaaattgaaagtgagctaagt
gccaatatttttggtttagataatgaactcggagctattagctcatcctcttcaactgga
gcaaaagattggtttaatcctattacatgcctaaaattacacagacttcaagacagtgta
gatccgaaaatgctccaattccacttacttttggctatccgctctgtagttgctaatctt
ggagtgcagatcaacagaatgaaaggtcactctcatttacagtccccacttaagtttgtg
agtggtttaggaccaagaaaagccaaatctttggcattttatttagactctcatccagga
ccaatttctaccagaagccaattaagacaagatgacaaccataatgaaacaacaaaccat
agaaaatcatcatctattgataataatcattatgaatacgactttagacaaggtgaacaa
catcaagatggttgtctcacaaagaatgtctatttgaatgctcaagtctttcttagagtt
gatgaagaaagctgtaatgaaagagaatacaataggaatttgaacatatttgatattagt
cgacttagcgatgtggaggataaggagctagttttgacaattctaggtaatattcgtgat
caagtttctgaggaaagtgtatctggaattagacaaaagtctaaagaaaaggatgagaca
gtactttggacttggatttcaaaaagaagctcaaagcttgagacacttgatcttgaagct
tatgcaaagcttatgtatgaaaaccaagatagaccaagacttcttccatatcttaataga
atgcttagagaacttaagaagccttatgactgttcatttgtttcaagagaatttagaggt
attgaaaagtctagacaactcagagaatcttttgagatttctaaagaagatttatttatt
ggttgtgagattacatgcagaattacaggagttttaaacaacgttagaggaccttctaga
tgtccaattacactttggtttgatcaatataatatgaaagtagtgcttgaagattttgat
acattatgggaagaactccttgacgagtttcctaagcttcaatccgtctcatttgataat
ttatttaaattgaatactcctttacaagctattgttacaaatatagatttttctcaacat
tgtgtatttgttaatttatctcagagtaagatttgtaatatattaaattacttaattgat
ggagtttggagacaacaacagtatcgtcttgatatgatagagaaacatagatatgatagt
aattctggaggatcttcacaatctcaaggtggacaaacaaacaatacagattcatcatcg
atttctatgcataatatagcaattcaagaataccaaagaaatgactttaacttattacaa
gatgatctatctgctttaatttggacagatattcgtcactttgcctttatattgttcaaa
aagaacttgaatgtattatctacaagctcaggactgaatctcaactctggattaggcaag
aatggtattggatcaggagacagactttgggacagagagagtaggggtgataacaagtat
cgtggaacaatattacgtacaattcatcatccaaactttaggagttggactcatgagcag
ataattgagcatatgaagagtgagacagtacctttgggagaagtaataattaaatcatca
actaaatatatagataagttgaatatgtatgtaaaagtttgtgaaaatccctttatgttt
aaggtgattaacatagatgagtttgaccaaaggcttcctggagagctaggaagaagatta
agaatagatgattcagattttaatgatattgatcaaatattgattcaatatgtacatcct
ttgaaggtacacctttcaaatgtatttagtcatccaaagtatagatctaatatggaatat
cagaatctggttactgagcttttagtggaatcctctacaagtggtaactcgatagtttgg
ggtataacagctgataaacagattccttgtagatttcatctaatttcagttccaccaaat
tcaagagtaggttcaagtggagctaggatacactttgaagatgggatttatgtaaatcat
aaagggtttcagttatggaggaaatccgagaatactttgagaaagctgttgaactggtgg
aagactgagggattctttaagagatctaaacatttggaggattataagaggtataaggaa
tacatggtgagacagaagcaagggaaagcgaactcagaggacgattttggatccagaaag
ttcggaacttctcatcataacagttatcattataattctggtggtggaggtggtggagga
ggaagtggaggataccagagccaacattcgagcaattattctcactctagacataatcat
gcagcagacaactttgggagtcagacaggtggaagccatagcaagtctggagggggagca
tcccaatatggatcccactcccactctggaggattcaggaaatccttccacggatatcct
cctcctcagatggagggtggatcggctcaccattaccctcctgctcctgaaccttatgaa
tctagcttccaaggcaattataggtactcgaggagatga
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integrated database retrieval system
