Cryptosporidium parvum: cgd7_1070
Help
Entry
cgd7_1070 CDS
T00168
Name
(RefSeq) snRNP core protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
cpv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
cgd7_1070
09123 Folding, sorting and degradation
03018 RNA degradation
cgd7_1070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd7_1070
03041 Spliceosome [BR:
cpv03041
]
cgd7_1070
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
cgd7_1070
mRNA degradation factors
5'-3' decay
Lsm complex
cgd7_1070
Spliceosome [BR:
cpv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
cgd7_1070
Complex C
U2 snRNP components
cgd7_1070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
SM-ATX
Motif
Other DBs
NCBI-GeneID:
3371777
NCBI-ProteinID:
XP_628293
ApiDB_CryptoDB:
cgd7_1070
UniProt:
Q5CYT7
LinkDB
All DBs
Position
7:269870..270193
Genome browser
AA seq
107 aa
AA seq
DB search
NFSIKLFFNFLQTLIEKQVVVTVELKNDLQITGTLHSIDQYLNIKLNNTTVNQNESFIHL
GSLKNCFIRGSVVRYIFFPPSEVDIELLQKACRKELRSMNDCKEKQK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
aatttttctataaagctattttttaattttctacaaactctaatagagaaacaggtagtg
gtaacagtggagctcaagaatgatttacaaataacaggaactttacatagtattgatcaa
tatttgaatataaagctaaataatacaacagtaaatcaaaacgagagttttattcatttg
ggatctctcaagaattgctttattagaggaagtgttgtaagatatatcttctttcctcct
tctgaagtggatattgaacttcttcagaaagcttgtagaaaggagttaagaagtatgaat
gattgcaaagaaaagcaaaagtga
DBGET
integrated database retrieval system