Cryptosporidium parvum: cgd7_230
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Entry
cgd7_230 CDS
T00168
Name
(RefSeq) RPR45-like archaeo-eukaryotic exosomal RNAse PH
KO
K12586
exosome complex component RRP43
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cgd7_230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd7_230
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
cgd7_230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
3372038
NCBI-ProteinID:
XP_628216
ApiDB_CryptoDB:
cgd7_230
UniProt:
Q5CZ14
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All DBs
Position
7:complement(54664..55539)
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AA seq
291 aa
AA seq
DB search
MNKSSLWYLRPDEYLNRFLEQGVRCDGRKPEVCRNFKLELNELSSSNYGAVSVRIGNSSY
IACCSPQIIHTGLDQESNNAITNTRINVSLELPTICGFTGNPNHSNFVSNSITECLNDSR
IINKEAFITKFQGKELHWLIDIKVVCLSYDGNPLDYTLIASIASLRNTILPKNLVWDDDY
NWFRISSDPISKDEVKREQMMQDSSSFFLKKVPIFVSFSYLNDSIWVCDPNYMEDSIGSS
VTICCVDNQINTLQTQCISKYTPGKLKSNLSQLIDVASKRADEIRACLLGQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagttcactttggtatttaagacctgatgagtacttgaaccgcttcttggaa
caaggagtaaggtgtgacggaaggaaacctgaagtttgtaggaattttaagctagaattg
aacgagctaagttctagcaattatggagctgtctctgtcagaatagggaactcatcctat
attgcctgctgtagcccccagataattcatacaggccttgatcaagaatcaaataatgcc
ataacaaatacaagaataaatgtttccttagaacttccaaccatatgtggatttacaggc
aaccctaatcattccaactttgtttccaattccatcacagagtgtttgaatgactcgcgc
attattaacaaggaagcattcataacaaaattccagggtaaagagttacactggttgatt
gacattaaagtggtttgcctatcttacgatggaaacccattggattatacactaattgca
tcgattgcatcccttcgtaacactattttacctaagaacttggtttgggatgacgactac
aattggttcaggatttcctctgatccgatttctaaagatgaagttaaaagagaacaaatg
atgcaagatagttcaagtttctttctaaaaaaagttccaatatttgtttccttttcatac
cttaatgatagcatatgggtttgcgatccaaactacatggaggactcgataggaagcagc
gttactatttgctgcgttgataaccaaatcaacactttgcagacccaatgcattagcaaa
tacactccaggaaagttaaaaagcaacctgagccaacttattgatgttgcctctaaaaga
gcagacgaaatcagagcatgtctcttggggcaatga
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