Cryptosporidium parvum: cgd7_2380
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Entry
cgd7_2380 CDS
T00168
Name
(RefSeq) RRP45-like archaeo-eukaryotic exosomal rnase, PH domain
KO
K03678
exosome complex component RRP45
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cgd7_2380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd7_2380
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
cgd7_2380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF2977
Motif
Other DBs
NCBI-GeneID:
3371969
NCBI-ProteinID:
XP_628411
ApiDB_CryptoDB:
cgd7_2380
UniProt:
Q5CYG9
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Position
7:complement(567743..569041)
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AA seq
432 aa
AA seq
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RLWPIFYKIDNNCKCKKLFIKSIKMDTFIVSVREYGLRLDGRTMNEYRNVKINLNKNYGE
VEVNIGRTHVLSVVKSELVAPSQERSSEGFISFTVDIGPLSINPTSHAFRHNRTTLGTEI
ANYIERILKETGAIDTEILCILSGVCVWSVKCEIHVLFDDGNLFDACLMATLSGLKHYRY
NEIDVDSFLKKSKCEGFGERDYQRLENTIRKLEMIPFNVHHFPLSISIGYINGKEGLSYI
VDPNSDEESISDTIIHISINDKQEVCGISKFGGAKLSLNQINFAIQIATIHSEKLHQEFK
KAFDGEYLKRLKCSDNKGKIVIDQFNTNSKRTETEFDANPPLIMQILSNNEPDKSDNEVS
SSIAFSSPSNMEIKNAEFDEYETQHESKLEKASFSDRICESLEQVQLDQSVEPIELLNAV
KSNIKIKKRKKG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
cgcctttggccaattttctataaaatagataataattgcaaatgtaagaaattattcatt
aaaagcataaaaatggatactttcatcgtttctgtccgtgaatacggccttaggcttgat
ggtaggacaatgaatgaatacagaaacgtaaaaattaatttaaacaagaactacggcgaa
gtagaagttaatataggtcgaactcatgtattaagtgtagtaaaaagtgaacttgtagct
cccagccaagaaagatcttctgaaggatttatttcatttacagtggatataggtccttta
agtataaaccctacaagccacgcatttcgtcataacagaacaactttggggactgaaatt
gccaattatattgagagaatactgaaagaaactggagcgattgatactgagattctatgt
atattatcaggagtttgtgtttggtcagtaaaatgtgagatacatgtgctttttgacgat
ggtaatttgtttgatgcatgtttaatggctacattatcgggactaaagcactatagatat
aatgaaatagatgtagatagttttctgaaaaaatcaaaatgcgaaggatttggagaaagg
gattatcaaaggttggaaaatacaattcgaaagttggaaatgattcctttcaatgttcat
cactttcccctctctatttccatagggtacattaatggcaaggaagggctctcatatatt
gtcgatccaaattcagatgaagaaagcatttcagatacaataattcatatatctattaac
gataaacaagaagtctgtggaatcagtaaattcggaggtgccaagttaagtttgaatcaa
atcaattttgcaattcagattgcaacaatacacagtgaaaaacttcatcaggaatttaaa
aaagcttttgatggagaatacctaaaaagattaaaatgttctgataataaagggaaaatt
gttatagatcaatttaatacaaattcgaaaagaaccgaaacagaatttgatgcgaatcca
cctttaattatgcaaattttatctaataatgaaccagataaatcagataatgaagtatca
agttccattgctttttcaagtcccagcaatatggaaattaaaaatgccgagtttgatgag
tatgagactcaacatgaatctaaattagaaaaggcctctttttcggatcgtatttgcgag
agcctggaacaagtgcagcttgatcaaagtgttgaaccaattgaactattaaatgcagtt
aaatcgaatattaagattaagaagagaaagaagggttaa
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