Cryptosporidium parvum: cgd7_2790
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Entry
cgd7_2790 CDS
T00168
Name
(RefSeq) regena domain protein (CCR-Not complex protein subunit 3)
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cgd7_2790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd7_2790
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
cgd7_2790
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
cgd7_2790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
3372265
NCBI-ProteinID:
XP_628448
ApiDB_CryptoDB:
cgd7_2790
UniProt:
Q5CYD2
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Position
7:complement(667071..668255)
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AA seq
394 aa
AA seq
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MADSELNLICSIFSKCESDLKAIVSIVNILSKNKYEVNKFETEIREIKEKLHIVEKKIVE
SRIVSSNQTDFVSEKYILEKCHESLQSLKGSIVNFKEIKMNNDHSQGDKKLQINDFESKS
VGDLLNDEFSELRIDNEVKLSQINADNYIKDSFSPEKLNENDIYTRERIVKPGNNTEIPI
ENTDEYKHSIGFRMDVSKHLNTDILDNSFNNKLEIQDSIGRHIQYTPRMVWHNPRSDFPS
RPLEKLANTSFFDKLALDTLFFIFYFQQGTFQQFLSIQELKRKKWQFHKKCFAWFYKRSD
SKITTEDAEVADYIYFDFEKDWCQKIKNDFAFEYIHLDDTPIVINKNNESNACYNSKACA
DKDQISFNSDISENIFNADGAINDHCTINNPSNK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagcgaattaaatctgatatgctcaattttttcaaaatgtgaaagcgattta
aaagctatagtgtctattgtaaatattttatcaaaaaataaatatgaagttaataagttc
gaaacagaaatcagagaaattaaagaaaagttgcatattgtagagaagaaaatagtagaa
agtagaattgtgtcatctaatcaaacggatttcgtttctgagaagtatattttggaaaag
tgtcatgagtcactacagtctctaaagggatctattgttaactttaaagaaataaaaatg
aataatgatcattcacaaggggacaaaaaattgcaaataaatgatttcgaatcaaagtct
gtaggcgatcttttaaatgacgaattttctgaactaagaattgataatgaagttaaactt
agccaaattaatgccgataattatattaaggatagtttcagtccagaaaaacttaatgaa
aacgatatttacactagggagagaattgttaaacctggaaataatacagagataccgatt
gaaaatacggatgaatataagcattcgataggatttcgtatggatgtatctaaacattta
aatacagatattctagataattcatttaataacaaactagagatacaggattcaattggc
aggcatattcaatatactccaagaatggtttggcataatccaagatctgattttccttct
agaccacttgaaaagttggctaacacttcgttttttgataagttggctttggacacttta
ttttttattttttattttcaacaagggacatttcaacagttcttatcaattcaagagctt
aaaagaaaaaaatggcaatttcataaaaaatgttttgcttggttttataaaagatctgat
tcaaaaattactacagaagatgccgaagttgcagactatatatattttgattttgagaaa
gattggtgccaaaagataaaaaatgactttgcatttgaatatattcacctggatgataca
cctattgttattaacaaaaataatgagtctaatgcttgctacaacagcaaggcttgtgct
gacaaagatcaaataagttttaattcagatatttctgaaaatattttcaatgctgatggc
gcaattaatgatcattgcacaattaataacccttcaaataaatag
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