Cryptosporidium parvum: cgd7_3520
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Entry
cgd7_3520 CDS
T00168
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03018
RNA degradation
cpv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
cgd7_3520
09123 Folding, sorting and degradation
03018 RNA degradation
cgd7_3520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd7_3520
03041 Spliceosome [BR:
cpv03041
]
cgd7_3520
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
cgd7_3520
mRNA degradation factors
5'-3' decay
Lsm complex
cgd7_3520
Spliceosome [BR:
cpv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
cgd7_3520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin6
DUF150_C
Motif
Other DBs
NCBI-GeneID:
3371982
NCBI-ProteinID:
XP_628515
ApiDB_CryptoDB:
cgd7_3520
UniProt:
Q5CY65
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Position
7:complement(797415..797636)
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AA seq
73 aa
AA seq
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KLVPLAKYYLSFNIEMSSKSILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDET
VEYMFGRLLILFV
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
aaattggtaccgctcgctaaatattatttgtcatttaatatagaaatgtcatcaaaatca
atattagggttgaacaagtttaataacaaagaaataaaagtaaaattatgtggcggaaga
gaagttattggaatattacgtggatttgatgcggttacgaaccttgttttggatgaaaca
gttgaatatatgtttggtaggttactaatattatttgtttaa
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