Cryptosporidium parvum: cgd7_4620
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Entry
cgd7_4620 CDS
T00168
Name
(RefSeq) Rf-A (OB fold protein)
KO
K07466
replication factor A1
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03030
DNA replication
cpv03420
Nucleotide excision repair
cpv03430
Mismatch repair
cpv03440
Homologous recombination
cpv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
cgd7_4620
03420 Nucleotide excision repair
cgd7_4620
03430 Mismatch repair
cgd7_4620
03440 Homologous recombination
cgd7_4620
03460 Fanconi anemia pathway
cgd7_4620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpv03000
]
cgd7_4620
03032 DNA replication proteins [BR:
cpv03032
]
cgd7_4620
03400 DNA repair and recombination proteins [BR:
cpv03400
]
cgd7_4620
Transcription factors [BR:
cpv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
cgd7_4620
DNA replication proteins [BR:
cpv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
cgd7_4620
DNA repair and recombination proteins [BR:
cpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
cgd7_4620
MMR (mismatch excision repair)
cgd7_4620
DSBR (double strand breaks repair)
HR (homologous recombination)
cgd7_4620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
OB_MEIOB_N
OB_POT1A
Motif
Other DBs
NCBI-GeneID:
3371949
NCBI-ProteinID:
XP_628611
ApiDB_CryptoDB:
cgd7_4620
UniProt:
Q5CXW9
LinkDB
All DBs
Position
7:1054025..1056148
Genome browser
AA seq
707 aa
AA seq
DB search
LILKIFFIHRVHVTDAGSNMFDNGSPLSIRLVMSDATQLQPGDMIKITRFSLNEIHSTKL
VTVVQYDKVGHWSGFTSIGKATPHPCMGSSKAAGGGPGDQKQPAVQNQMGASSGTPNSSH
STEPSSVSMQQQQQQHNIQMQPQQVGYRASGPSEQMPGSAGPISGRDGMQSSGPGSMNMG
NTMRSGPYGGGGMGSGQSKGPVSRNQEIPVYPIKNITSYLHRWRIVGRVVSKSDIRKFSS
SKTKEGKVFSFEICDADGSEIRATCFTKAVDKFYDMLKEGEVYSFSRGDVKEANTRFNTT
GHEFEIIFNEDAEIQSLPQDDRIPKKTFNFVPISEIRGYSKGQSLDLLGILLKAGPITTI
TVKSTGADTQKRELTIIDKSGHSIDLTLWSERTHLDEGLISQNPVIAVKNAIVEEFNGFR
LKLGSSSSIEWNPSGVEQSQELKNWFFSQSNLHESVVSLSSSSPSPGNTNSSSSAKRLSI
DEIVATATSGSSSSDMLDGGIWVHTYGTIRSIRDNKYYWSSCPKCKRKVTEIEDPNSINA
LVLPYGSEKETSTSLGPNYHCPSCQQSIENPIKKYILSCEIVDSTGTIRAVAFAEHGETI
MDGLSPEKLESLKENTDKNTEDCFSDKLFSEWVFKLNGKKELYQDSEIIKYRIFSAEDMT
NPEILNREAKRKLEYIYDKLNNIKETNTSSNAYSAVKVGMGFGQFGY
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ctaattttaaaaatttttttcattcacagagtccacgtaacagatgcaggttcaaatatg
tttgataatggttctccgttgagcataaggctggtaatgtcggatgctactcagttacaa
ccaggagatatgattaagataacaagattttctttgaatgagatccattccacaaagttg
gttactgttgttcagtacgacaaagttggacattggtcaggatttacttctattggaaag
gcaactccacatccatgtatggggtccagcaaggctgcagggggaggcccgggggaccag
aagcagcctgcagttcaaaatcagatgggagcttcatcaggcactccaaattcaagtcat
tcaactgagccaagtagcgtcagcatgcaacaacaacaacagcaacacaatattcagatg
cagccacaacaagttggatacagagcgagcgggccatcagaacaaatgccaggatccgca
ggacccatttcaggtagagatggcatgcaatcctcagggccaggctctatgaatatgggt
aatacaatgagaagtggtccatacggaggaggtggaatgggttcaggtcagtcaaagggt
ccagtttcaaggaatcaggaaattccagtgtatccaataaagaacataacttcttatcta
cacaggtggagaattgttggccgtgtagtgagcaaaagcgatatcagaaagttctcatca
tccaagacaaaggaaggcaaagtgttttcattcgagatttgtgacgctgatgggagcgag
atcagggcaacatgtttcaccaaagccgttgataaattctatgatatgctgaaagagggg
gaagtatatagtttctcaagaggagatgtcaaagaagcaaatactcgttttaatactaca
gggcatgaatttgaaataatcttcaacgaagatgcagaaattcaaagtttgccacaggat
gatcggatcccaaagaagacctttaattttgttcctatttcagaaatccgaggctattcc
aagggccaatcactggatcttttgggcattttactcaaagctggaccaattacaacaatt
accgttaaatctaccggtgcagatacccagaaaagagaactaacaatcattgataagtct
ggccacagcattgacttgacattgtggtcagaaaggacccacttagatgagggcctcatt
tctcaaaacccagttattgctgttaaaaacgccattgttgaggagtttaatggatttaga
ttgaaactgggatcaagctcttccattgaatggaacccttctggagttgaacaatcgcag
gaactcaagaattggttcttctcccagtcaaatttacacgagtcggttgtttcgctctcg
tcctctagtccaagtcctggaaacactaactcaagttcctcagccaaaaggcttagtatt
gatgaaattgtagctactgctacttctgggtctagctcgtctgatatgctcgatggaggg
atttgggttcacacttatggaactataaggtcaattcgtgataataagtactactggagt
agctgccctaaatgtaagagaaaagttactgaaatcgaagatcctaacagtattaacgct
ttggtgttgccttatgggtcagaaaaggagactagtacatctctcggaccaaactaccac
tgtccaagttgccagcagtccattgaaaaccctattaaaaagtacatcttgagttgtgag
attgttgactctacaggaacaatcagagccgtagcttttgcagaacatggagaaaccata
atggatggtctttcaccagaaaaacttgaatctcttaaagagaatacagacaaaaatact
gaggattgcttctctgataaactcttcagtgagtgggtctttaaactgaatggaaaaaaa
gaactctatcaggactctgagataattaagtaccgaatcttttcagctgaagatatgaca
aatccagaaatcctaaacagagaggccaaaagaaagctcgagtatatttatgacaagctt
aataatattaaggaaactaatactagtagcaatgcttatagtgctgttaaagtcggtatg
ggatttggacagtttggatattga
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