Cryptosporidium parvum: cgd7_5220
Help
Entry
cgd7_5220 CDS
T00168
Name
(RefSeq) splicing factor with 3 RRM domains
KO
K13091
RNA-binding protein 23/39
Organism
cpv
Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpv03041
]
cgd7_5220
Spliceosome [BR:
cpv03041
]
Common components
Common spliceosomal components
General mRNP proteins
cgd7_5220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBM39linker
RRM_3
Motif
Other DBs
NCBI-GeneID:
3372096
NCBI-ProteinID:
XP_628665
ApiDB_CryptoDB:
cgd7_5220
UniProt:
Q5CXR5
LinkDB
All DBs
Position
7:complement(1203926..1205617)
Genome browser
AA seq
563 aa
AA seq
DB search
MDDYNNRLKSDFPRDYSRESSKRNYDYRKKDFYGRESDVTGHSNSYKPYRNEYPYKFRRK
DQYFRKDSSRSPERYRNRNQISKGIEYSRSNSISPDRISSNSSRRYPNPNFEKNLDSKLD
KVKKDLEYSSRDDLTVLVMNLNLDAREFEVYEFFTTYAGNVRDIRIIRDHRTGRSKGVCY
VEFYSVESVLKALKLSGQKIMNTPITVQASQAEKNRAAKLAKLEEIKAETTPLLLRVDGL
VGLLARIRRDEIESLFSTFGKVNKIDIEIDKKTQRCLGFAHILFEKAIEGHDAIKALNNF
EIAGQKITVTISQECNSSIKVSNCLASSTFNSYLSPSAVSNSQNEPSKGNSSAHNLERVS
ELDKLDESEEAVLLGADSRNFLTKKLLARAQSQIDNPPPIQETSNDTSSSTILNTSLPSP
SSSIPSLNQLSNTNQNLPVLTEAYSQSSSNNIEFNNSEIHLRCLLLSNMFTEQSIKESME
EDETIEQILEEIQADVEEECGKYGTLLECFLDKEKMDGNVWVKYSRPEEASKAKMVFHGR
FFAGRKLNVSFIKDEEFPKAVKS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggacgattacaataataggcttaaatcagattttccaagagactactccagggaatca
agcaaaaggaattacgactataggaaaaaagacttctatggaagagaaagcgatgtaact
ggacattctaactcatataaaccttatagaaatgaatacccatataaatttagaagaaaa
gatcaatactttaggaaagatagttctagatcccctgaaagatataggaatagaaatcaa
atatccaaaggaatagaatattcaagatcaaattctatatcaccagatagaatctcctct
aatagtagtaggagatatccaaatccaaattttgaaaagaatctggattccaagctggac
aaggtcaaaaaagatttagaatattctagtagggatgacttgactgttttagtcatgaat
ttaaacttggatgcacgtgagtttgaagtttatgagttctttacaacttatgctggaaat
gtacgagatatacgtattatccgggaccatcgcacaggaaggtctaaaggagtttgttat
gtagagttttattctgtggagtcagtgcttaaggctctcaaacttagcggccaaaagatt
atgaatacacctatcacggttcaggcatcccaagctgaaaagaacagagctgccaagctc
gctaaattggaagaaattaaggctgaaactacacctcttctgcttagagttgatggattg
gttggtttattggcaagaataagacgagatgaaatcgaaagcttgttttcaacatttggt
aaagttaacaaaattgatattgaaattgacaaaaagactcaaagatgtcttggatttgct
catattttgtttgaaaaggctattgaaggccacgatgccatcaaagctctaaataacttt
gaaattgctggacaaaagattactgttacaatatctcaagaatgcaattccagtattaaa
gtttccaattgtttggcctcctccacctttaatagttatttgtctccttctgcagtatcc
aattctcaaaatgaaccttctaaggggaattcctcagctcataatttggaaagagtatct
gaacttgataaattagatgaatcagaagaggcagtactccttggtgcagactcaagaaac
tttctgacaaaaaagctattagcaagggctcaatctcagattgataatcctcctcccatc
caagaaacctctaatgatacttcttcatccactatattaaacacctcattgccttctccc
tcttcctctataccttctcttaatcagttatctaacactaatcaaaatcttccagtctta
acagaagcgtattcacaatcttcttcaaataacattgaattcaataactctgaaatacat
ctccgttgcctgttacttagtaatatgttcactgaacaaagtattaaagaatctatggag
gaagatgaaactatcgaacagatattggaggaaattcaagctgatgttgaggaagaatgt
ggaaaatacggaacactacttgaatgttttctggataaggagaagatggacggaaatgtg
tgggtaaaatactctcgtccagaggaggcctctaaagctaagatggttttccacgggagg
ttctttgctggaaggaaattaaatgtaagcttcatcaaagatgaggaattccctaaagcc
gttaaatcctag
DBGET
integrated database retrieval system
