Cryptosporidium parvum: cgd7_5280
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Entry
cgd7_5280 CDS
T00168
Name
(RefSeq) structure-specific recognition protein 1 (SSRP1) (recombination signal sequence recognition protein)
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cpv
Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpv03000
]
cgd7_5280
03036 Chromosome and associated proteins [BR:
cpv03036
]
cgd7_5280
Transcription factors [BR:
cpv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
cgd7_5280
Chromosome and associated proteins [BR:
cpv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
cgd7_5280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
WD40_like
COMM_domain
DUF515
Motif
Other DBs
NCBI-GeneID:
3372099
NCBI-ProteinID:
XP_628671
ApiDB_CryptoDB:
cgd7_5280
UniProt:
Q5CXQ9
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Position
7:complement(1214884..1216455)
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AA seq
523 aa
AA seq
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MATTAGVLSYGNIRGLGYQDQGIFKASKELFGWKNRRTNATYHYKPEEVMGVEWIQTSCE
DSSCQLRVFIREKKDCIHFTGFKTEDYSVIKSHFETYYGINLETKELNTKGINWGDLTIH
NDTICIGNEGKVMMYVPSININQIAMPSKSELVLEFNEGVNAGEDCDELMEIRLFVPNQE
NSLDGNSLSSAEKLRSDLLKLTGIGSSGSMDKVCRWNDIHLLVPRGRYEIEVLVNCLKLH
GKSFDYTILFQSISRLFLLPRPGTSLVNLVVALETPMRQGNTKYPFVVMQFDTQQDENIE
MPLNLSEKEIQRFTGLSPIMTGKFWDIVTRILKSLTGHSIIVPGDFRSASMYHCIRCSYK
AQDGLLYPLNRSFIFITKPVILIRFDDILNIEFSRMGGNQTRFFELTITIRGGGDYSFTS
IDKAEYNPLIKFLQEKNIRIKNLQESLDSSSRRTTSRSKDQDSSKKESSTKSILEQDLPS
DDEDDEDFENDEESYSSSSGSSDGDEEGGSEDEDEADDDDDDE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaccgctggagtactatcttatggaaatattagagggctgggttaccaggac
caaggaatatttaaagcaagtaaagaactatttgggtggaagaatagaagaacaaatgca
acttatcattataaaccagaggaagttatgggagttgaatggatacaaacaagttgtgag
gatagcagctgtcaattaagagtatttatcagagaaaaaaaggattgcatccactttaca
ggttttaagactgaagattatagtgtaattaagagccattttgagacatattatggaatt
aatttggagactaaggagctgaatacaaaaggaattaattggggagatttaactattcac
aatgataccatatgtataggtaatgaaggcaaagtaatgatgtatgttccgagtattaat
attaatcaaatagcaatgccatctaaatcagagttagttttggagttcaatgaaggagtt
aatgcaggagaagattgtgatgaattaatggagatacgtttattcgtaccaaatcaagaa
aattcccttgatggaaattccttgtcatcagcagaaaaattgagatctgatttattaaag
ctgacaggaataggatctagtggatctatggacaaagtctgtcgttggaatgatattcac
ttattggttccaagaggtagatacgaaattgaagttttggttaactgcttaaaactccat
ggtaaatctttcgattatacaatcttattccaatcaatttccagactatttctactccca
aggcctggtacatccttggttaacctagtagtagcattagaaactccaatgagacaagga
aacacaaaatacccatttgttgtaatgcaatttgatacacaacaagatgagaatattgaa
atgcctttaaatctttcagaaaaagaaattcaaaggttcactgggctatcccctataatg
accggtaaattctgggatatagttactcgtattttaaagtccctaacagggcactcaatc
atagttccaggagatttcagatctgcatctatgtaccactgtattagatgctcatataag
gctcaggatggtctactttatcctcttaatcgtagcttcatttttattacaaaacctgta
atattaattagatttgatgatatcttgaatattgagttttcaagaatgggtggtaatcaa
actagattctttgaattaactattacaattaggggtggaggtgactacagtttcacaagt
attgataaagctgagtataatccactcataaaattcttacaagaaaagaatatcagaatt
aaaaatcttcaggagagtcttgattcttcatctagaagaacaacttctagatcaaaagat
caggattcttctaagaaagaatcatcaaccaagtctattcttgagcaagacctaccaagt
gatgatgaagatgacgaagactttgaaaatgatgaggagtcttattcttcaagtagtggc
agttccgatggagatgaggagggtgggagtgaagatgaagatgaggctgacgatgatgat
gatgacgagtaa
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