Cryptosporidium parvum: cgd7_970
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Entry
cgd7_970 CDS
T00168
Name
(RefSeq) Syf1p. protein with 8 HAT domains
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
cgd7_970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd7_970
03041 Spliceosome [BR:
cpv03041
]
cgd7_970
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
cgd7_970
Spliceosome [BR:
cpv03041
]
Complex B
Other components
Prp19-related factors
cgd7_970
Complex C
cgd7_970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_M
ANAPC5
ATP-synt_ab_C
Cyclin_C
Motif
Other DBs
NCBI-GeneID:
3371994
NCBI-ProteinID:
XP_628285
ApiDB_CryptoDB:
cgd7_970
UniProt:
Q5CYU5
LinkDB
All DBs
Position
7:complement(233382..236444)
Genome browser
AA seq
1020 aa
AA seq
DB search
MNGVDKSLEFLQTLRYGLLRENLFLELRGIKEFEDQLGKRKGQTGVWIEYISKIRRDIEI
NRDGLSHEVAYMMDKTELNNELDEWKNRDAQEKQGIDDNNLELMYKQDYCLLILRRALSS
TNRRVSSIWVEYLSFMEDYENFMEIKLSKRLIGLDLTEEYENSLKSCNDLDLWLRYNAYL
RKSRLEFTNSRLVLDRSLKSLPIEQHHKIWERYLEYSMEMNIPELSISISRRFILFSYVE
GIRMYIQALIDGGRYEECLDKLIDIVLKKEGNLRIQQTFEGLKKGVLVGGVNYKIGEMDD
LIGLILVIITEYVLKIDYNKILTYTMNLMLEKLRTCDSRVYQDINNENIQDDEDQQKMKP
IFRLTFGEVVCKVSEIFMKLANWEQVKSTFNFGIENCLFVYDFITIYDSLMMFSTIHLNR
MLKSSQSLDSSLSNKNEYSPEIIENNILNLEKVIKDHKKLLFRTMVKSDTNNVSRWIEYI
NVLIQNETIEKKSHPSLEVVKVFEEALETIDFSIIKDKSKNVFWIFYASYMTSSIDNGHD
RLDIDKKKSSKSDQLIDLARDIFERSLSEDYIEDYSLIWTEWIEMELRFGNFEEALNLSR
RSICMAKEQKSKITLRNGRIWNLAADLEMSFGTLESSRALIEDLFESGMATANLLVTFGS
YLRDKECYEESFSLYERSINCLTIQFSFGLWLDYIDSFISHYNNGLNIIKLFDDSDIDTT
IYGNLKIDRLRDVFDQCLESLISWKKSSLKEKDRKYYLNCVFIAYGIYSAYEAKIGRVSR
SFDILNRAMNELEDHDQHKLNLYSKWIKLTLKCRDISYTRKIFDMAIDDIKASDIIIRLS
LRYINFELNMGEVNRVRSIFIFAGDLIPNIYLMNEHIEIFNKFWSSWNQFELEYGNEDTI
KDMLRIKKNVALVSGHSNINSIQINQQREDQKSNDLMEQTESSDNNSEDRNTSSDSDDDI
ILSTSSDEQSDLNKKSDEEMSNSDSSSGSDSDLVSYSENESDSDLQIKQGDGNSNRDEEL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagtggataaaagtttggaatttctacaaactttaaggtatggcctattgaga
gagaacttatttttggaattgagaggtataaaggaatttgaggatcaattaggaaaaaga
aagggtcaaactggtgtatggattgaatatatatcaaagataaggagagatattgaaatt
aatagagatggattgagccatgaggttgcttatatgatggataagacagagttaaataat
gaattagatgaatggaaaaatagggatgctcaagaaaaacagggtattgatgataataat
cttgaattaatgtataagcaggattactgtttgttaatattaaggagagcattatcttca
actaatagaagagtatcatcaatatgggtggagtatcttagttttatggaagattatgag
aattttatggaaatcaagttaagtaaaagattaataggattagatttaactgaggaatat
gaaaatagtctcaaatcatgcaatgatttagatctttggctaagatataatgcctattta
cgtaaatctcgtctagaatttaccaactcacgtttagttttagacagaagtttgaagagt
ttgcctattgaacaacatcacaagatatgggaaaggtatttggaatattcaatggaaatg
aatattccagaattatcaataagtatttcaaggcggtttatattattttcatatgttgag
ggaattaggatgtatattcaagctttgattgatggaggtagatatgaagaatgtttagat
aagcttatagatatagttttgaaaaaggaaggaaatttaagaattcaacaaacttttgaa
ggcttgaaaaagggagtattagttggaggagttaactataagattggagaaatggatgac
ttgattggcttaattttggttataattactgagtatgtattaaaaattgactataataag
attctaacttatacaatgaatttaatgcttgagaaattgagaacatgtgatagtcgtgtt
tatcaggatattaataatgagaatattcaagatgatgaagatcaacagaaaatgaaaccc
atatttaggcttacttttggagaggtggtttgtaaagtttctgagatttttatgaaatta
gccaattgggaacaggtgaaaagtacttttaattttggaatagagaattgtctttttgtt
tatgattttattacaatttatgattctctaatgatgttttcaacaattcatttgaataga
atgttaaaatcttcacaaagcttggattcatctttatctaataaaaatgaatattctcca
gaaattattgaaaataatatcttaaacttggagaaagtcattaaagatcataaaaagtta
ttatttaggacaatggtcaagagtgatacaaataatgtatctagatggatcgagtatatt
aatgtattaatacagaatgaaacaatagaaaagaaaagtcatccatcacttgaggtagta
aaagtatttgaagaagccttagaaactatagacttttcaataataaaagataagagtaag
aatgttttctggatattttatgcatcttatatgacaagtagtattgataatggtcatgat
agattggatattgataagaaaaagagtagtaaaagtgatcaattaattgatttggcaaga
gatatatttgagagaagcttatcagaagattatattgaggattattctctaatttggaca
gagtggattgaaatggaacttagatttgggaattttgaagaagctttaaatttatccaga
agaagtatatgtatggcaaaagaacaaaaaagcaaaataaccttaagaaatggtcgtata
tggaatttggcagctgatcttgagatgtcttttggaactttggaatcttcaagagcatta
attgaggatttatttgagagtggtatggcaacagcaaatttattggtaacttttggatct
tatttgagggataaagagtgctacgaggaatcattttcactatatgaacgttctattaat
tgtttaacaatacagttttcatttggcttatggctcgattatattgatagttttatttca
cattataataatggactaaatattattaaactttttgatgattcagatatagatacaaca
atttatggtaatttaaagatcgatcgtttaagagatgtctttgatcaatgtttagaatct
ctaataagttggaaaaagagtagtttaaaggaaaaagatcgaaaatattacttaaattgt
gtatttattgcttatggtatttattcagcttatgaagccaagattggaagagtaagtagg
tcttttgatatacttaacagagcaatgaatgaattagaagatcatgatcaacataaacta
aatctgtattctaaatggattaaattgaccctaaaatgcagagatatctcatatactaga
aagatatttgatatggcaattgatgatattaaagcttctgatattattattagattgtct
ttaagatatataaattttgaattaaatatgggagaagttaatagagttagatcaatattt
atttttgctggtgatttgattccaaatatatatttgatgaatgagcatattgaaatattt
aataaattctggagttcctggaaccagtttgagctggaatacggaaacgaggataccata
aaggatatgcttaggattaagaagaatgtagctttggtttctggtcactctaatataaac
tcgatccaaattaatcaacagcgagaagatcagaagtcgaatgatttaatggagcaaaca
gaatcctctgacaataactctgaagacagaaacacttcttctgattcagatgatgatatt
atactttccacttcttcagatgagcagagtgatttgaacaagaagagtgatgaagaaatg
tcaaattcagattcgagttcaggttcggattcagatttagtttcatactctgaaaatgag
tctgattctgacttgcaaataaagcaaggtgatggtaactcaaatagagacgaagaattg
tga
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