Cryptosporidium parvum: cgd8_370
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Entry
cgd8_370 CDS
T00168
Name
(RefSeq) DNA repair protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
cgd8_370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpv03400
]
cgd8_370
DNA repair and recombination proteins [BR:
cpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
cgd8_370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
Defb50
Motif
Other DBs
NCBI-GeneID:
3372481
NCBI-ProteinID:
XP_001388418
ApiDB_CryptoDB:
cgd8_370
UniProt:
A3FQP9
LinkDB
All DBs
Position
8:88765..92493
Genome browser
AA seq
1242 aa
AA seq
DB search
MDKKSKQNLSSQRGDRQSSILSFFSPKPGVKKEASNFLQDTSTPVPKNKSSRLDDILMSE
DKDIERELLNSELSFGEQKLESINRDSSTRLRDLEMLSADGNATTCETTPCKSKNLKSDK
FGVETTGRRIRRICDSDEELNSDSEVLSRRIKRRFNDDGLEDNNNERSDLPASQMDGDIS
NFGYDIKDDEVLEAEMAAKIEEKIPSDFTDLGKSLPKSRRKETEMKFQEGGDSVINADEE
LGKELLGTAAAQSSLLFRDYVEAMLQIGRNFSLPSWVQLRNIRDSKGTRPLDPCYDPSTI
WVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKMGKFYELFYIDAYICQKHCDL
RWTSSDSKPHVGFPETALHAYANKLVELGYRVVVVEQMETPKELEERNRSASRGVKKDKA
IKRSVNEVFTNGTLVRPDMLSDMASILMTLYFSKKDSEDLTYEIGVVCVDITTGKAELIN
IEEKGDQFLQVRTIVCQVQPKEIAYLPGNIPLSILRYLSSIVPSIQLTNFRDFVDSVLAI
NDILETFEKLNVPVPDVVNRLCNESKSLCCALSGTFRYLTTILLCDRLIMTGTFTEYDPS
VSKHLIVNVGAIKDLELLQSQHGDEKNSLFGFLKHTITPGGTRLLKRWITYPLVNTERIN
ERLDSVKWLMDNSEKLYEFRDELRAIERSASSASRGSRKKYSQHLDFERLINRITSGVLQ
NKRGAVYFSNVVQRRFDEFVNSMNLFDSVLQCIIRVFGDENLRKDMPKLLAALTGIKDES
SEGFLENIFATTERLRSLVTLDSNGKDWIPVPGNCKEYDDLLESINETKLCFDEELKRIS
KQMNTTAISFVNNKYRYEVECPESIPKSRFPDSAEITSSKKGYVRFHTEEIKQLVYDLEY
KEEQLQKSLFPYLHLMCKEFHSELSSFMGISDSISQLDVLSSLALVSLDTSDGPFCKPVF
LSKEETNGLPMLELKESRHPVVAKLKTNYIPNDILLNGGSSPAPCSLVTGPNMGGKSTIL
RQTCISVIMAQIGCYVPASECRLTAVDKIFTRIGAYDLIIEGKSTFLVELEETADILNHS
SEDSLVIIDELGRGTSTFDGTAISIATLEYISRVIKCRCLFSTHLHLLCDEFSNDTKVLP
FHMDLKLNNETRSITFLYKFISGICPKSYGMNVAQLAGIPQEVVDNSVALAKDVESSTLL
LRSISETKKLLMDVLSQDNFSKIQEFFKNNNKSILNCLESLS
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaatcaaaacaaaatttaagctctcagagaggagatcgccagtcaagtatc
ctttcattcttctctccaaaacctggggttaagaaggaagcaagtaatttcttacaagat
acatcaactccagttccaaagaacaaaagttcgaggttggatgatatattaatgagtgaa
gacaaggatattgaaagggagcttttgaattcagaactgagttttggtgaacaaaagttg
gaatctataaatagagattcatcaacgagacttagagatttagaaatgctttcagcagat
gggaatgcaactacatgtgagactacaccatgtaagtcaaaaaacctaaaatctgacaaa
tttggtgtggaaacaacaggaagaagaattcgaagaatttgtgattcagacgaggaacta
aattcagattcggaggttctttcacgtagaatcaaaaggagatttaatgatgatggatta
gaagacaacaataatgaaagaagtgatttaccagcttcacagatggatggagatatctca
aactttgggtacgatattaaggatgatgaggttctggaggcggaaatggcagcgaaaatt
gaggaaaagattccttcagactttacagatttgggaaagagcctgccaaaatcccgtaga
aaagagacagaaatgaagtttcaagaaggaggagattcagtaataaatgcagatgaggag
ttggggaaagaactccttggtacagctgcagcacagagtagtttgctatttagggattac
gtcgaagcaatgcttcaaataggtcgtaatttctcacttccatcttgggttcaattacga
aatattagggattccaaaggtactcgtcctttagatccatgttatgacccatcaacaatt
tgggtgccaagttcaaatagtagagaggcaaaagaggagaggatgcactttactcctgca
atggagcagtattgggagcttaagaaagaacactttgataagctattgttctttaaaatg
gggaaattttacgagttattttatatagacgcttatatttgtcagaaacattgtgactta
agatggacatcttcggattctaagccgcatgttgggtttcctgagacagctttgcatgca
tatgcaaataagctagtggagttaggatatagagtggttgtagtggagcaaatggagact
ccaaaggagttggaagagcgaaataggagtgcatcaagaggggtaaagaaagataaagca
ataaagaggagcgtaaacgaggtgtttacaaatggtactttggtacgccctgatatgtta
agcgatatggctagcattttaatgactttatacttttcaaagaaagattctgaagatttg
acttacgagattggagttgtttgtgttgatattactacaggcaaggcagaacttataaat
attgaggagaagggagaccagtttttgcaggtcaggacaattgtatgccaggtacaacca
aaggaaattgcatatttacctgggaatattcctttgtctattttgagatacttgagttcc
attgtcccttcaatccagctaaccaactttagagattttgttgactcagttttagcaatt
aatgatattttggagacttttgaaaagctaaatgttccagttccagatgtagtaaatcgt
ctttgcaatgagtcaaaatctctatgttgtgcattatctggtacttttcggtacttaaca
acaatattactttgcgatagattaattatgacaggaacatttactgagtatgatccatct
gtttctaagcatctgatagtgaatgttggagcaataaaggatttagaattattacagtct
cagcatggtgatgaaaagaactctctatttggctttttaaaacatactattactccagga
ggaaccagattattaaaaagatggattacatatcctttagtcaacactgaaaggattaat
gaacgcttagactcggttaagtggttaatggataactctgaaaagttatatgaatttaga
gatgagcttagagctattgaaaggtcagcatcttcagcttcaagaggttcaagaaagaag
tactcacagcacctagattttgagcgtttgataaacaggattacttcgggtgttttgcag
aataagagaggagcagtttacttttcgaacgttgttcaaagaaggtttgatgagtttgtt
aactcaatgaatctttttgactcagttcttcaatgtattattcgtgtttttggtgatgag
aacctaagaaaagatatgcctaagcttttggctgctttaactggaatcaaggatgaatct
tctgagggattccttgagaatatatttgctactactgaaagattaagatctttggttact
ttggactcaaatggtaaggattggattcctgttcctggtaattgcaaggaatatgatgat
ctattagagtccataaatgagacaaagttatgttttgatgaggaactcaagagaataagt
aaacaaatgaatactacagcaatttcttttgttaacaataaatacaggtacgaggtagaa
tgcccagaaagcattccaaagtcaagattcccagattctgcagaaattacatcatcaaag
aaaggttacgtgagattccatactgaagaaattaaacaacttgtatacgatcttgaatat
aaggaggagcagctacagaagagtttattcccttatttacatcttatgtgcaaagagttt
cattcagaattatcatcttttatgggaatttcggattcaatttctcagttagacgtatta
tcttccttggctctagtttcactggatacttcagatggcccattctgcaagccagttttt
ctctctaaagaagaaaccaatgggctacctatgttagagctcaaggagagcagacatcct
gttgtagctaaactcaaaactaattatattcccaatgatatattgttgaacggaggttcc
tcaccagctccttgttctttagttactggacctaatatgggtggaaaatctacaattctt
agacaaacatgtatttctgtaataatggctcagattggatgctatgtaccagcatccgaa
tgtagattaacagcagtggataagattttcactagaattggtgcttatgatttaattatt
gaagggaaaagcacattcttggttgagcttgaagagacagctgatattcttaatcattca
tctgaggattcgctggtaattattgatgagcttggaagaggaacttcaacttttgatggg
acagcaatttctattgctactcttgaatacatttcaagagtaatcaagtgcaggtgtctt
ttttcaactcatcttcacttactttgcgatgagttttcaaatgacacaaaagttcttcca
tttcatatggatttaaagctaaataatgaaacaagatcaattacttttctatacaagttc
atttccggtatttgtccaaaatcttatggtatgaatgttgcacaattagcagggatacca
caagaagttgttgataattcagtagctttagctaaagatgtggagtcttctactttactt
ttgaggagcatttctgagactaagaagcttttaatggatgttctaagccaagataacttt
tctaaaatacaagagtttttcaagaacaacaacaaatctattctaaactgtctggaatca
ttatcctaa
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