Cryptosporidium parvum: cgd8_4100
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Entry
cgd8_4100 CDS
T00168
Name
(RefSeq) PRP43 involved in spliceosome disassembly mRNA splicing
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
cgd8_4100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpv03041
]
cgd8_4100
03009 Ribosome biogenesis [BR:
cpv03009
]
cgd8_4100
Enzymes [BR:
cpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
cgd8_4100
Spliceosome [BR:
cpv03041
]
Complex A
U2 snRNP components
U2 related factors
cgd8_4100
Complex B
cgd8_4100
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
cgd8_4100
Ribosome biogenesis [BR:
cpv03009
]
Eukaryotic type
90S particles
Helicases
cgd8_4100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ResIII
AAA_19
nSTAND3
SRP54
TsaE
ATPase
AAA_7
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
3374187
NCBI-ProteinID:
XP_627301
ApiDB_CryptoDB:
cgd8_4100
UniProt:
Q5CVG8
LinkDB
All DBs
Position
8:1026319..1028463
Genome browser
AA seq
714 aa
AA seq
DB search
MGSGRKRIKVEENEKSIEVDKELNPWNNDKPYSNKYYELRKFRKSLPAWSERKTFCKLVK
KNQVVILVGDTGSGKTTQCPQFILESGLGGNLKIACTQPRRVAAMSVAQRVSEEMDVCLG
DIVGYTIRFEDKTNENTRLKYVTDGMLLREAMYDNDLSQYGVIIIDEAHERTISTDILMG
SLKEILLRRNFESKNPLRLVVMSATLESTKFQSYFGNDSPVFSIPGRMFPVELIYNIKPE
KDYLEASIQKVLDIHENEAPGDILLFLTGEEEIEQAKQRLEFLSSPLEEQFGELVIIPLY
SSLPPYKQQKIFDKTPGPKYPGGPTGRKVVISTNIAETSVTIDGIVYVIDPGFSKQKVYN
PRTRVESLLVSPISKASAKQRMGRAGRTREGKCFRLYTKEAFESELADQTHPEILRSNLS
NVVLILKSLGINDLVHFDFMDPPAPETLMRALEQLYFLEAMDDEGELTKLGKLMTEFPID
PQLARMLIKSSELGCASQILSLASLLNVPNIFLRPRDKSKEADYAKSSFVDPDGDHLTLL
YAFESFREVLYKDENKAKKFAKENFLNYRALISAENVRKQLERTYQKHILNTGNHINSDN
DQISESKLNISIRKAITQGFFMQAACLHRSGHYTTVRDNQVVHLHPSCVLSSKPEWVLYN
EFVLTSRNFIRTVTKIRGEWLLEISPKYYNLEDFPECDSKKKLAHLNYFSNKKF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggaagaaaaagaataaaagtagaagaaaatgagaaatcaattgaagttgat
aaagaattaaatccatggaacaatgataaaccatattcaaataaatattatgaattaaga
aaattcagaaaatctcttccagcttggtcagaaagaaaaactttctgtaaattagtaaaa
aagaaccaagttgtgattttagttggagatactggtagtggaaaaacaacgcaatgccca
caatttatattagaatctggattaggaggaaatttaaagattgcatgtactcaaccacgt
agagtggcggcaatgagtgtagctcagagagtttcagaagaaatggatgtttgtttaggt
gatattgttggatatacaattagatttgaagataagacaaatgaaaatacgagacttaag
tatgtaacagatggaatgttacttagagaagcaatgtatgataatgatttatctcaatat
ggagtaattattattgatgaagcacatgagagaacaatctcaacagatattttaatggga
tcgcttaaagaaatattactaagaagaaattttgaatcaaaaaatcctttaagattagta
gtaatgagtgcaacattagaatcaacaaaatttcaaagttattttggtaatgattcacca
gttttttcaattccaggaagaatgttccctgttgaattaatatataatataaaaccagaa
aaagactatttagaagcatcaatacaaaaagtacttgatatacatgagaatgaagcacca
ggtgatatattattatttttaacaggagaagaggaaatagagcaggcaaaacaacgtcta
gaatttttaagttcacctttagaagaacaatttggtgaattagtaataataccattatat
tcatcattacctccatataaacaacagaaaatatttgataaaactccaggaccaaaatat
cctggtggtcctacaggacgtaaagttgtaataagtacaaatattgcagaaactagtgtt
acaattgatggaatagtttatgtaatagatccaggattttcaaaacaaaaagtatataat
ccccgtacaagagtagaatcattactcgtttcaccaatatcaaaagcttcagcaaaacaa
agaatgggaagagctggtcgtacaagagaaggtaaatgttttagattatatactaaagaa
gcttttgaatcagaattggcagatcaaacacatcctgaaatattaagaagtaatttaagt
aatgttgtattaattttaaaaagtttaggtattaatgatttagttcattttgactttatg
gatcctccagcacctgaaactttaatgagagctcttgaacagctttattttttagaggca
atggatgatgaaggagaactaactaaattgggaaaacttatgacggaatttccaattgat
cctcaattggctagaatgttaataaagtcatcagaattaggatgtgcttctcagatatta
tctttagcaagtttattaaatgtaccaaatatattcttaagaccaagagataaatcaaaa
gaagctgattatgcaaaatctagttttgttgatccagatggggatcatttaactttgtta
tatgcatttgagtcttttagagaagtattatacaaggatgagaataaagcaaaaaaattt
gcaaaggagaatttcttgaattatagagcactaatttcagcagaaaatgtaagaaaacag
cttgaaagaacttatcaaaaacatatacttaatacaggtaatcatattaattctgataat
gatcaaatttcagaatcaaaacttaatatttctattagaaaagcaattacccagggattc
ttcatgcaagcagcttgtttacataggtctgggcattatactacagttagagataatcaa
gtagtacatcttcatccaagttgtgttttaagttcaaaaccagaatgggtattatataat
gagtttgttctgacttctagaaattttatcagaacagtaactaagattagaggtgaatgg
ttacttgagatttctccaaaatactataatcttgaagatttcccggaatgtgattctaag
aagaagcttgctcatcttaattatttttctaataaaaaattctaa
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