Cryptosporidium parvum: cgd8_4750
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Entry
cgd8_4750 CDS
T00168
Name
(RefSeq) Dbp5p-like eIF4A-1-family RNA SFII helicase
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03013
Nucleocytoplasmic transport
cpv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
cgd8_4750
03015 mRNA surveillance pathway
cgd8_4750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd8_4750
Enzymes [BR:
cpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
cgd8_4750
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
cgd8_4750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
3374347
NCBI-ProteinID:
XP_627359
ApiDB_CryptoDB:
cgd8_4750
UniProt:
Q5CVB0
LinkDB
All DBs
Position
8:complement(1176323..1177879)
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AA seq
518 aa
AA seq
DB search
MSTEDSVINNSNSSRIETEENGEVANVDELKEYFKNITSSNSQLEDSKKVQEEEERTSKE
DDMERKDTENDDIDDFKSPKSDNSAFQFRDVQNNSSISVQTVDPKAQLYSAKDWSDLNLS
PDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLGKVDTRII
HPQCMCLCPTRELARQNQDVVNELGKFTGITTWLVVAQGDKYDKTIGSQIIICTPGKMQD
FLKKRSFPTEFMKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQILLFSATYHEEVRL
FAEKIVPNANKINVKKEELTLNTIQQFYVICNDDADKLSFLSDLYACMSIGQSIIFVNTR
KTAFSIAENMRRDGHAISVICGTQTNSGEKMDHEIRDQVMDSFRSGESKVLIATDVLSRG
IDVPQVTLVINFDIPVRFSSTNSIDIVNQTSSVQVENETYLHRIGRTGRFGLNGISINFI
LPHQLSLIQQIQDYYDCNIQLIDKDLEHLEQILKSLRS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgaagattccgttattaacaatagcaactctagtaggatagaaacagaggaa
aatggagaagttgcaaatgtagatgaacttaaggaatattttaagaatattacttcatca
aattctcaattagaagattcaaaaaaggttcaagaagaggaagaaagaacatctaaagaa
gacgatatggaaaggaaagacactgaaaatgatgatatagatgattttaagtctccaaaa
agcgataattctgcttttcaatttagagatgttcaaaataactcatcaatatcagttcaa
actgtagatcctaaagctcagctgtattctgcgaaagattggtcagatcttaatctttca
cctgatctacttaaaggtatttataataaaggttttaatcgtccatctaagattcaagct
gcagcattaccactcatattaaattcaccaatgaatttaattgctcaagctcataatgga
agtggtaaaactgcgacttttgctttagctatgttggggaaagttgatacaaggattatt
catccccaatgtatgtgtttatgtccaactagagagcttgcacgtcaaaaccaggatgtt
gtaaatgaacttggaaagtttacaggaatcacaacatggcttgttgttgctcaaggagat
aaatacgataagactattggatctcagataattatatgtactcctggaaaaatgcaagac
tttttaaagaaaagatcttttccaacagaatttatgaagttaatggttattgatgaagct
gatgaaatgattgatcatagaaatatgatggcttctcaagttggacaaatcaggaaattc
tttagacaaaatttacaaatccttttattcagtgcaacttaccacgaggaagttcgtctt
tttgctgaaaagattgtacccaatgcaaataaaattaatgttaaaaaagaagagttaaca
ttgaatactattcaacagttctatgtaatttgtaatgatgatgctgataagctttcattt
ttatcagatttgtatgcttgtatgtcaattggacagtctatcatttttgttaatactaga
aaaacagccttttctatagctgaaaatatgagaagagatggacatgcaatttctgttata
tgtggtacccaaactaattctggtgagaaaatggatcatgaaattcgtgatcaagttatg
gattcatttagatcaggtgaaagcaaagttttaattgctactgatgttttatcaagaggt
attgatgttcctcaagtcactcttgtgattaattttgatattcctgtcagattcagctcc
acaaattctattgatattgttaatcagacatcttcagttcaagttgaaaatgagacatat
ttgcatagaattggaagaactggaagatttggattaaatggtatatctattaactttatt
cttcctcatcagctttctttaattcaacaaattcaagattattatgattgtaatattcaa
ctaattgacaaggatctcgaacatcttgagcagatccttaagtctttaagatcttga
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