Coccidioides posadasii: 90965216
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Entry
90965216 CDS
T01332
Symbol
SPT5_2, D8B26_004836
Name
(RefSeq) transcription elongation factor spt5
KO
K15172
transcription elongation factor SPT5
Organism
cpw
Coccidioides posadasii
Pathway
cpw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
90965216 (SPT5_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
90965216 (SPT5_2)
03019 Messenger RNA biogenesis [BR:
cpw03019
]
90965216 (SPT5_2)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
90965216 (SPT5_2)
RNA polymerase I system
90965216 (SPT5_2)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
90965216 (SPT5_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
Spt5_N
KOW1_SPT5
KOW2_Spt5
KOW
KOWx_SPT5
KOW5_SPT5
Motif
Other DBs
NCBI-GeneID:
90965216
NCBI-ProteinID:
XP_065980692
LinkDB
All DBs
Position
2:complement(join(7382534..7384009,7384073..7384429))
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AA seq
610 aa
AA seq
DB search
MSHHPASFIDHDFGSEEEDDDFNPAPVEESDAEDKEVTGEKRRSADRDVEDADGEGVENA
GGPVEKHDDEDKDGEDEEHVGDEDAVGERDGNGEDEEDEDEDEEEEEEEEEEEEEEEITG
RPRKRRRGGLNNFFEEEAEVEEEEEDVEDEEEEMEAEFVHPDDDAILPAGAETDDRRHRE
LDRKRDLEASMDAEKQAQALKERYGRNRAAASDLVVVPKRLLLPSVDDPSIWAVKCRPGK
EREIVFNIMKRIEERHPASRNPIRITSAFERGGTMSGYVYIEARKQADVMDALDNLSNVF
IRSKLTLISVKEMPDLLRVQKSEELQPGGWVRIKRGKYQGDLAQIEEVETNGLEVTVRLV
PRLDYGLNDDVQIPNGDTKRKRPGGKSAVARPPQRLFSEAEAKKRHSRYLSAAAGLGGKS
WTYLGDTYIDGFLIKDMKIQHLITKNVNPQLDEVTKFARGADDGTVNLDLASLAASLKDT
TGEDSYVPGDTVEVFSGEQKGVVGRVIAGRADIVSIKVVEGELEGQRLEVPVKGLRKRFR
EGDHVKVIGGSKYRDELGMVVRIKDDRVTLLTDMSMQEITVFSKDLREAEDVGVDGKLGQ
YDVHDLVQLE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccatccggcctcatttattgaccatgatttcggctctgaagaagaagacgat
gacttcaacccggcaccggtagaggagtccgatgctgaggacaaggaggtgacaggagag
aagcgccgcagcgcggatagagatgttgaagatgccgatggagagggcgttgaaaatgct
ggcggtcctgtagagaagcacgatgatgaggacaaggatggcgaggatgaagagcacgta
ggcgatgaagatgccgttggggagagagacgggaatggtgaagatgaagaggacgaggat
gaggacgaggaggaagaagaagaagaggaagaagaggaagaagaggaagagatcactggt
cgaccacgaaaacgtagacgaggcggactgaataatttcttcgaggaagaagcagaagtt
gaggaggaagaagaagatgtcgaggatgaagaagaagagatggaagccgaatttgttcat
cctgatgacgatgcaatcctgcccgctggcgccgagaccgatgatcgaagacatcgtgaa
ctcgatagaaaacgagacctcgaggcatccatggatgcagaaaaacaggctcaagccttg
aaagagcgatatggacgaaaccgtgccgccgcctctgacttggtagttgttcccaagagg
ttattgctgccaagcgtcgacgatccgagtatctgggctgtcaagtgccggcctggaaag
gagcgggagatagtctttaatataatgaagagaatagaggagcgtcatcctgcttcaagg
aaccccattcggattacatctgcgtttgagcgaggcggaactatgagcggctacgtttac
attgaagctcggaagcaggcggatgtcatggacgctttggacaatttatcgaacgtgttc
attagatccaaattgactttaatctctgtcaaggaaatgcctgatcttttgagggtccag
aaatcggaagaattgcagcccggaggttgggtccgcataaagcgaggaaaatatcaaggc
gatttggcgcaaatcgaagaggtcgaaaccaatgggctcgaagttactgtcaggcttgta
cctcgtctcgattacggtttgaatgatgatgtccagattccaaacggcgatacaaagcgg
aagcgacctggtggcaaaagtgctgtcgcccgcccaccacagcgcctgttcagcgaagca
gaagcgaagaagcgacatagcagatacttatctgctgccgctgggctcggaggtaaatca
tggacttatctcggcgatacctatatcgacgggttcctcatcaaagacatgaaaatccag
catcttattaccaagaatgttaatccccagcttgatgaagttaccaaatttgcacgcggt
gctgatgatggtactgtcaacctggaccttgcttcgctggcagctagtctcaaagacact
acgggtgaagactcctatgtgccgggagacacggtagaagtctttagcggggaacagaaa
ggtgttgttggcagggttattgccggtcgcgcagatattgtttccatcaaggtcgtcgaa
ggtgaactggagggtcagaggcttgaggttcctgttaaaggtttaagaaaacgattccga
gaaggcgaccatgtcaaagttatcggtggtagtaaataccgtgacgaactcggaatggtt
gtccgcattaaggatgaccgggttactttgctcactgatatgagcatgcaagagatcacg
gttttcagcaaagatttgagggaagcggaagatgttggcgtcgatggaaaactaggccag
tacgacgttcatgatcttgtacaacttgagtaa
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