Coccidioides posadasii: 9690574
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Entry
9690574 CDS
T01332
Symbol
D8B26_004246
Name
(RefSeq) uncharacterized protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
cpw
Coccidioides posadasii
Pathway
cpw03420
Nucleotide excision repair
cpw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9690574 (D8B26_004246)
09124 Replication and repair
03420 Nucleotide excision repair
9690574 (D8B26_004246)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpw04121
]
9690574 (D8B26_004246)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9690574 (D8B26_004246)
Ubiquitin system [BR:
cpw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
9690574 (D8B26_004246)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
9690574 (D8B26_004246)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT140_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_Nup120_160
PAXX
Motif
Other DBs
NCBI-GeneID:
9690574
NCBI-ProteinID:
XP_003065105
UniProt:
C5PJ11
LinkDB
All DBs
Position
2:complement(join(5578364..5579483,5579540..5579641,5579732..5579940))
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AA seq
476 aa
AA seq
DB search
MNSYLLNRSQGSICPSSFHAAQCSRLIQCLAPAPGIRFSSASASTTDGDEVWAHKAGVNV
LAIDHYDRRFMVSGGADASVHLWDFESRGAQSTHLHRSIASVSKSSNTSAHTHALTSISI
YPFDPTPATVLTTSHDTTLKLSSIGESEITPVHTFSLHSTPYSHSLSSHPSSHLLIGVGT
SDKAVRLLDLRSGLSTHSLPGHTGAVLSVQWAPHNPHLIASASKDNRVLIFDVRRGGHNS
TIASLDMDDAVGVLPPPTAPPTFHPRKPFARGSRAHNGAVTGVRWSPQGDFIITAGQDSR
LRVWDATTGANTLVHFGPRIRNSASMHLAERAPLVVPDNVSAQEAPFFLWPNYSDPDDRG
EIFIFSIRNEGELVTHLKVPGIPSRERMRAIGKPSALTAARINTLTWRGNGGAGEGMEMF
SGHGDGTIRCWASRTEEEIDEIEAEREETEMEERKRKRDVLEELYRGLMQPGVTFT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatatcttttaaatagatctcaaggatctatatgcccttcatctttccacgcg
gcgcaatgttcgcgactcatccagtgcctcgcgccagcgccgggaattcgattctcaagc
gcgtcagcatcaaccacagatggcgatgaagtgtgggcacacaaagcaggcgtgaatgtg
ctggctatcgatcactatgatagacgcttcatggtctctggcggcgccgatgcgtccgtc
cacctgtgggacttcgaaagccgtggagcgcagtcaacccacctccataggtcgattgca
tctgtttcgaaatcatcgaacacatcagcacacacgcacgcattgacttcaatttcaatc
tatccctttgacccgacgccagcaaccgtgctcaccacatcccacgacacaaccctcaaa
ctctcgtcgattggcgaatctgaaatcactccagtccataccttttcccttcattcaacg
ccctattcccattccctttcctcccatccgtcctctcacctcctcattggcgtcggaaca
tcggacaaagccgtccgtctccttgatctccgttccggactttccacccactccctccct
ggccacacaggcgccgttttatcagtccaatgggcccctcataacccccacctaatcgcc
tccgcttcaaaagacaaccgtgttctcatcttcgacgtccgccgcggcggccacaattcc
accattgcttccctcgacatggatgacgccgtgggcgttctcccaccgcccaccgcgcca
cctacattccatccacggaaacccttcgcccgtggatctcgcgctcacaacggcgccgtc
accggcgtccgctggagtccacagggcgacttcatcatcaccgccggtcaagattcgcgt
ctacgagtatgggacgcgacaaccggcgccaacacacttgtccacttcggcccacgcatc
cgcaacagtgcatcgatgcaccttgccgagcgtgcgcctcttgtcgtcccagacaacgtc
tctgcccaagaagccccgtttttcctctggcccaattattccgacccggacgaccgcggc
gaaatattcatcttttccatccgcaatgaaggtgaattggtcacgcatctaaaagtcccc
ggcatcccatcgcgagagcggatgcgagcaatcgggaaaccctcagcgctgacggcggca
cggataaatacgttgacttggcgcggaaacggcggggctggagaggggatggagatgttt
tcgggacatggcgatggcacgattaggtgctgggcgtcgaggacagaggaagaaatcgac
gagatcgaagccgagcgagaggaaacggaaatggaggaacggaagaggaaaagagacgtt
ttggaggagctgtatcggggcttgatgcagccgggcgtcacgtttacttga
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integrated database retrieval system
