Coccidioides posadasii: 9690607
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Entry
9690607 CDS
T01332
Symbol
D8B26_004286
Name
(RefSeq) uncharacterized protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cpw
Coccidioides posadasii
Pathway
cpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
9690607 (D8B26_004286)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9690607 (D8B26_004286)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
9690607 (D8B26_004286)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
9690607 (D8B26_004286)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
9690607
NCBI-ProteinID:
XP_003065138
UniProt:
C5PJ44
LinkDB
All DBs
Position
2:complement(join(5702365..5702457,5702565..5702919,5702990..5703267,5703329..5703384,5703444..5703973,5704183..5704324,5704396..5704489))
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AA seq
515 aa
AA seq
DB search
MSSFPSQQQQQQQARSSNPSLLSGRMPNGKVGGAATWGFGVPMGGAPGLQNNQPRTVNAM
NTFAQSVGGSQPATPLDLSEFPSLSGGSQPSQTPTTGQAVWSTINQRPAQQTLLQRQLQP
PVSSQAPSRASQTQSNQPSQSHTSRDDLFPSGSQFATQLDDFRNGGQGISGQLSSNNQPQ
TGNIEEFPPLGKQTPGDLGQDRRESLMQSSNLASYGNTMSYANQGLPGQARTSVGSAIHA
RRDGTGVTSPVGATSASRSPIGPVQNGVGSQEQEDSTNLMAGQHATRPEDFSEQPQQTIP
FPEETQPQETVATNQTSDQTPITQMSDREKYGLAGLLRMIHSESPDVASLAIGQDLMSLG
LDLNQPEPLHLSFASPFVPSGSGVPLQPDFTLPACYNVANVQPLQTRIPSFTDETLFYIF
YSMPRDIMQELVAEELMGRKWRYHKIERAWLTRDDSYPNPVEVERGISERGVYLWWDTAT
WKKVRREFILRYADLDNRLDPARNFMRGMSFPQTS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcttcccctcccaacagcaacagcagcaacaagcaagatcttcgaacccttca
ctgctctccggtcggatgcccaatggtaaagttggaggtgctgcaacttggggttttggt
gtgccaatgggaggagccccaggactgcagaacaatcagccgcggactgtgaatgctatg
aatacatttgcacaaagcgtaggcgggtctcaacctgctacccccttagatctttccgaa
ttcccctctttgtcaggcggctctcagccatcccagaccccgacaactggacaggcagtt
tggagtactattaatcaacgaccagcccagcaaaccctcctccagagacaattacagcct
ccggtgtcctcgcaagcgccctcgagagcctcgcaaacacaatccaatcaaccttcacag
tcccatacctctcgagatgacctttttccttcaggctcgcagttcgcgactcaactcgac
gactttagaaatggcggacaaggaataagcggacagctttcaagtaacaatcagccacag
accggcaatatcgaggaatttccgccgctaggaaaacaaacgccgggtgacctgggacag
gaccgcagggagtctctgatgcaatctagcaatctcgcaagttacggaaatacaatgtca
tacgctaatcaggggcttccggggcaagcaagaacctccgtgggcagcgcaatacacgca
cgacgcgacggcaccggcgtcacttccccagtaggagcaacatcagcatcgcgatctccg
attggcccagttcaaaatggcgtcggcagtcaggagcaagaggattctacaaatctcatg
gctggacagcacgctactcgccctgaagacttttccgagcagccgcagcaaacaatacct
tttccggaggaaactcagccccaagagacagttgcgacaaatcaaacctccgaccaaact
cccatcacgcaaatgagcgaccgagagaaatatggacttgcgggattgctcagaatgata
catagcgaaagccctgacgttgcaagtttggcgatagggcaagatctaatgagtctgggg
ttagacttgaatcaaccagagcctcttcatctctcctttgcctcccccttcgttccatcg
ggttcaggggttcccctccaaccagattttactctccccgcctgttataatgttgccaac
gtacaaccccttcagacacgaattccaagcttcaccgacgaaacactcttttacatattc
tacagcatgcctcgtgatattatgcaggaacttgttgctgaggagctcatgggccgaaaa
tggaggtatcacaaaatcgagcgtgcatggctcactcgtgacgattcatatcccaaccct
gtcgaagttgaaaggggtataagtgagagaggagtgtatttgtggtgggacacagctacg
tggaagaaggtccggcgtgaattcatattgcggtacgctgatctggataatcggcttgac
cctgcccggaatttcatgcgcgggatgtctttccctcaaacctcttaa
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