Coccidioides posadasii: 9690830
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Entry
9690830 CDS
T01332
Symbol
MSH2, D8B26_001297
Name
(RefSeq) MutS-like protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
cpw
Coccidioides posadasii
Pathway
cpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
9690830 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9690830 (MSH2)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
9690830 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Clusterin
Motif
Other DBs
NCBI-GeneID:
9690830
NCBI-ProteinID:
XP_003065360
UniProt:
C5PEZ7
LinkDB
All DBs
Position
1:complement(join(4655081..4656340,4656394..4657935,4657988..4658011))
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AA seq
941 aa
AA seq
DB search
MSSRPELKVDDEVGFIRFFHSLPSKDDSTTVRVFDRGDWYTAHGTDAEYIARTVYKTTSV
LRTLGRSDTSGLPSVTMTVTVFRNFLREALFRLSKRIEIWSSQGGMGKGVWKLVKQASPG
NLQDVEDELGSGGGMMDTAPIILAVKISARASETRHVGVCFADASVRELGVSEFDDNDLY
SNFESLVIQLGVKECLVTTDGQKKDVELAKIRSIADSCGIAISSRPASDFHTRDIDQDLS
RLLKGERTAGTLPQTDLKLAMGAAAALIKYLGAMSDPSNFGQYQLYQHDLSQYMKLDSAA
LRALNLMPGPRDGVKSMSLYGLLNHCKTPVGGRLLAQWLKQPLMNHEDIEKRQQLVEAFV
SDTELRQTMQEDHLRSIPDLYRLAKKFQRNAATLEDVVRIYQVVIRLPGFINTLEAVMDE
QYQEPLEEEYTSKIRNLSNSFGKLAEMVETTVDLEALDHHEFIIKPEFDESLRIIRKKLD
KLRYDMDAEHRRVGRDLNQDTEKKLFLEDHRVHGWCFRLTRNEAGCIRNKREYQECSTQK
NGVYFTTSTMQSLRREHDQLSQNYNRTQTGLVNEVVNVAASYCPLLEQLAGVLAHLDVIV
SFAHVSVHAPTPYVRPKVHPRGTGNTILKEARHPCMEMQDDISFITNDVSLVRNESSFLI
ITGPNMGGKSTYIRQIGVVALMAQTGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFM
AEMLETANILKTATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFGLFATHFHE
LTALEERYPNSVKNLHVVAFIGDNVSDKQNNTASKKKREVTLLYRVEPGVCDQSFGIHVA
ELVRFPEKVVNMARQKAEELEDFTTAAEKGENSMDIDKYSAEEVAEGSSLLKAMLVKWKA
QLEAPGNENMTVEEKRQLMRDLVEADGRLKANKVFQGINAL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaggccggagcttaaggtcgacgacgaagtcggtttcattcgattcttccac
tcgctaccatcaaaggatgactctacaaccgttcgagttttcgaccgcggcgactggtat
acagctcatggcactgatgcggagtatatcgctcgcacggtctacaagaccacttctgtc
ctccggacgctcgggcggagcgatacaagcggattgccctccgtcacgatgacggtgaca
gtgttccggaattttcttcgagaagctctcttccgtttaagtaagaggatagagatatgg
tcgtctcaaggtggaatgggtaagggagtttggaaactggtcaagcaagcaagccctggg
aatttgcaggatgtcgaagatgagctgggttctggtggtgggatgatggatacagcaccg
atcatccttgccgttaagatctctgcgagagcgtctgagactaggcatgttggcgtttgc
tttgcagatgcgagtgttcgggagttgggtgtcagcgagtttgatgacaatgatctatat
tcaaattttgagtctttggtcattcagctcggggttaaagagtgtttggtcactacggat
gggcagaaaaaggacgttgagctcgcgaagataagatcaattgcggatagctgcgggatc
gcgatttcgagcaggccggcttctgatttccacacgagagatattgatcaagatttgtcg
aggctactgaaaggtgaacgtaccgccggaactttaccacaaactgatctcaagctggct
atgggcgccgcggctgccttgattaaatatcttggtgctatgtcggatccgtctaacttt
ggccagtatcaactttatcaacatgatctctcccagtatatgaagctggactccgctgca
ctgagagcgctgaatttaatgccaggcccgcgtgatggtgtgaaaagtatgagtttgtat
gggcttttgaatcattgcaaaacccctgtgggcgggcggctacttgcccagtggctgaag
cagcctttgatgaaccatgaagatattgaaaaaaggcagcaactcgtcgaagcgtttgtc
tcagacactgaactaaggcaaacaatgcaggaagaccacctcagatccatccctgatctc
tacagattggcgaagaagtttcaacgaaacgctgcaacccttgaagatgttgtcaggatt
taccaagttgtcatacggctgccaggatttattaacacccttgaggctgtcatggatgag
cagtatcaagagccgttggaagaagagtatacttcgaaaatccgcaatctttcaaacagc
tttggcaaattggcggaaatggtggagacaacagtcgacttggaagctctagatcatcat
gagtttattattaaacccgagttcgatgagagtctgcggataatcaggaaaaagttagac
aaactgaggtacgatatggacgctgagcatagacgtgtgggccgtgatttgaatcaagat
accgagaagaaactgttcctcgaggaccatcgggttcatggatggtgttttcgattaacc
cgaaacgaagcgggctgtatacgcaacaagcgggagtaccaggagtgctcaacccagaag
aacggcgtctacttcacaacatctacaatgcaatctcttcggcgagaacatgaccagtta
tctcaaaattataaccggacgcaaaccggtttggttaacgaagttgtcaacgtcgcagca
tcgtattgccctttgcttgaacagcttgcaggcgtgctggcacatctcgacgtcatcgtc
agcttcgctcatgtttcagtccacgctcctactccgtacgttcgaccaaaagtccatcct
cgtgggaccggcaatactatccttaaagaagcccgtcatccgtgcatggaaatgcaagat
gatatctcttttatcactaatgatgtttccctcgttcgtaacgaatcctcctttcttata
atcaccggtcctaatatgggcggtaagtccacctatatcaggcagattggtgtggttgcg
ctcatggcccaaactggctgctttgtgccgtgctctgaagcggagctcacgatatttgac
tgtatcctggctcgtgttggagcaagtgattcccagctcaagggcgtctcaacgtttatg
gccgaaatgctcgagaccgcaaatattctgaaaacagcaacatcggaatcgttgataata
attgacgagctcggtcgtgggacaagtacatatgacggatttgggcttgcttgggcaata
tccgagcacataattactgagattcgatgtttcggcctcttcgcaacccacttccatgaa
ttgacggcccttgaggaacgatatcccaactcggtcaagaaccttcacgtcgttgcattc
atcggggacaatgtaagcgacaagcagaataatacagcgagcaagaagaaacgagaagtt
accctgttataccgagtagagccaggggtctgcgatcagtcgtttgggatccacgtggcc
gaattggttcgcttcccggagaaagtcgtcaatatggcgcgtcagaaagctgaagagttg
gaagacttcacgacagcagctgaaaagggtgagaattccatggatatcgacaagtattcc
gccgaggaggtggcagaaggaagttctctgctcaaggccatgcttgtcaaatggaaagcc
cagctggaagctcctggcaatgagaatatgacggtggaagagaagagacaattaatgagg
gatctagttgaggcggatggcagactaaaggccaataaagtctttcaagggatcaatgct
ttgtga
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