Coccidioides posadasii: 9690867
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Entry
9690867 CDS
T01332
Symbol
VPS4, D8B26_001336
Name
(RefSeq) Vacuolar protein sorting-associated protein 4
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
cpw
Coccidioides posadasii
Pathway
cpw03250
Viral life cycle - HIV-1
cpw03272
Virion - Hepatitis viruses
cpw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
9690867 (VPS4)
03272 Virion - Hepatitis viruses
9690867 (VPS4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9690867 (VPS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpw04131
]
9690867 (VPS4)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9690867 (VPS4)
Membrane trafficking [BR:
cpw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
9690867 (VPS4)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
Check point factors
Other check point factors
9690867 (VPS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
RuvB_N
AAA_16
AAA_5
RNA_helicase
AAA_22
AAA_14
TIP49
DUF815
AAA_2
IstB_IS21
AAA_17
AAA_18
NPHP3_N
AAA_33
AAA_24
AAA_25
nSTAND3
AAA_7
Parvo_NS1
Mg_chelatase
AAA_28
NACHT
DUF5906
ATPase_2
PhoH
Torsin
Cytidylate_kin
ResIII
bpMoxR
USP8_dimer
Motif
Other DBs
NCBI-GeneID:
9690867
NCBI-ProteinID:
XP_003065397
UniProt:
C5PFC4
LinkDB
All DBs
Position
1:complement(join(4779385..4779606,4779665..4780115,4780177..4780506,4780586..4780884))
Genome browser
AA seq
433 aa
AA seq
DB search
MSNTDFLGRAIDTVRKAIEHDNAGEYEKAYQTYYSALELFMLALKWEKNPKSKEMIRAKT
GEYMERAEKLKNHLAGTDNRKKPSAVGANGKVAHGSGKGGKDDDDDDADTKKLRGALAGA
ILSEKPNVKWEDVAGLDAAKEALKEAVILPIKFPNLFTGRRQPWKGILLYGPPGTGKSYL
AKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFNMARENKPAIIFIDEIDALCGPRG
EGESEASRRIKTELLVQMDGVGNDTKGVLILGATNIPWQLDMAIRRRFQRRVHISLPDTA
ARMKMFMLNVGSTPCKLTQADYRALAEMTEGYSGSDISIAVQDALMQPVRKIQSATHYKK
VLLDDQEKLTPCSPGDHGAIEMSWVDVDADKLLEPPLLLRDFVKAVKSSRPTVSEEDLEK
NEEWTKKFGSEGA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaccgacttcctcggccgtgccatcgacacggtcagaaaagcgatcgagcat
gacaatgcgggggagtacgaaaaggcctaccagacgtactactccgccctcgagcttttc
atgctcgctctaaaatgggagaagaatcctaaatcgaaggaaatgattcgcgccaagacg
ggggagtacatggagagagcggaaaagctgaaaaaccacttagcggggacagacaatagg
aagaagcctagcgcggtgggcgcgaatgggaaggtagcgcatgggagtgggaaaggaggg
aaagacgacgacgacgatgacgccgacacgaagaaactacggggtgcactcgcgggcgct
atcttatcggagaagcctaatgtgaaatgggaggatgttgctggtcttgatgcggcgaaa
gaagcgctcaaagaagcggtcatattgcccattaagttcccaaatcttttcacgggaaga
cgccagccatggaagggaatattactctacggccctccaggcactggcaagtcgtattta
gcaaaagcggttgcgacagaggcaaatagcacatttttcagcgtgagcagtagtgatcta
gtttcaaagtggatgggtgagagtgagagacttgtaaaacaattattcaacatggcaaga
gaaaataagccagcgattatattcattgacgagatcgatgccctctgcgggcctcgtgga
gaaggggaatcagaagcatcccgccgaataaaaaccgaattacttgtccaaatggacggc
gtcggaaatgatacgaagggagtattgatccttggtgcaacaaatattccctggcaatta
gatatggctattcgacgaagatttcagcgcagggtgcacatcagtttacccgatacggcc
gcacgaatgaagatgtttatgctgaatgttggctcgacaccatgtaaattgacgcaagcg
gattaccgagcgctagccgaaatgacggagggctattctggtagtgatatcagtattgca
gtccaggatgctttaatgcagcctgtgagaaagattcagtcagctacacattataagaag
gttcttttagacgatcaagaaaagcttaccccgtgctctccaggcgatcatggggcgatt
gaaatgtcctgggtagatgttgatgctgataaacttcttgaacctccccttttgctaagg
gactttgtgaaagccgttaaatcctccaggccgacagttagcgaagaagatctggaaaaa
aatgaagaatggacgaagaagtttggcagcgaaggtgcctaa
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